Sequence diversity and cluster set summaries (rel. 194)

Sequence tallies include those from "model" organisms. To exclude model organisms, click here.
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Phylota TaxBrowser Mirror Table
NCBI taxon name1   Descendant species2 Descendant terminals Descendant genera Sequences (GIs) Seq. clusters3 Phylog. inform. seq. clusters4
Oryza   up to Oryzeae 37 40 - 131934 197 121
    Oryza (node only)
37 40 - 1 1 0
    environmental samples 
1 1 - 0 - -
    Oryza alta
1 1 - 149 55 0
    Oryza australiensis
1 1 - 509 234 0
    Oryza barthii
1 1 - 1191 572 0
    Oryza brachyantha
1 1 - 493 198 0
    Oryza coarctata
1 1 - 53 47 0
    Oryza eichingeri
1 1 - 454 135 0
    Oryza glaberrima
1 1 - 776 208 0
    Oryza glaberrima x Oryza sativa
1 1 - 244 228 0
    Oryza glumipatula
1 1 - 422 198 0
    Oryza grandiglumis
1 1 - 119 50 0
    Oryza granulata
1 1 - 498 194 0
    Oryza latifolia
1 1 - 226 82 0
    Oryza longiglumis
1 1 - 40 19 0
    Oryza longistaminata
1 1 - 271 118 0
    Oryza malampuzhaensis
1 1 - 69 27 0
    Oryza meridionalis
1 1 - 497 375 0
    Oryza meyeriana
1 1 - 65 24 0
    Oryza minuta
1 1 - 127 48 0
    Oryza neocaledonica
1 1 - 20 20 0
    Oryza nivara
1 1 - 1248 435 0
    Oryza nivara x Oryza rufipogon
1 1 - 5 2 0
    Oryza officinalis
1 1 - 686 273 0
    Oryza perennis
1 1 - 1 1 0
    Oryza punctata
1 1 - 638 259 0
    Oryza rhizomatis
1 1 - 294 143 0
    Oryza ridleyi
1 1 - 63 40 0
    Oryza rufipogon
1 1 - 12639 - -
    Oryza rufipogon x Oryza sativa
1 1 - 20 6 0
    Oryza sativa  (rice)
1 4 - 110069 3 1
    Oryza sativa (Indica Group) x Oryza nivara
1 1 - 1 1 0
    Oryza sativa x Oryza glaberrima
1 1 - 38 38 0
    Oryza sativa x Oryza longistaminata
1 1 - 0 - -
    Oryza schlechteri
1 1 - 5 4 0
    Oryza sp.
1 1 - 0 - -
    Oryza sp. IRGC 105360
1 1 - 1 1 0
    Oryza sp. IRGC 81916
1 1 - 2 2 0

   1Names refer to node and its subtree unless the term "node only" appears.
   2Taxa at species rank as determined by NCBI (including this node). Note that some of these have not been formally named yet and are not retrieved in certain NCBI Taxonomy searches (e.g., Marina sp. Lavin 5341), but they are associated with sequence(s) and are counted as species here.
   3Clusters built by exhaustive all-against-all BLAST searches. For further information of about this see here. A dash (-) means there were too many sequences to cluster or no sequences at all.
   4Phylogenetically informative clusters have four or more taxa (not GIs) represented.