Cluster set at subtree whose root is Salariinae (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0022071285454 0.863Lipophrys pholis haplotype CM6 D-loop, partial sequence; mitochondrial.
11111460460 1.000Lipophrys pholis vitellogenin II (VTGII) mRNA, partial cds.
22346738381709 0.900Microlipophrys velifer voucher LIVEST2 ribosomal protein S7 (S7) gene, partial cds.
33111131131 1.000Lipophrys pholis haplotype Gij10 D-loop, partial sequence; mitochondrial.
4469109205951427 0.544Lipophrys pavo mRNA for opsin.
554527613387617 0.896Lipophrys trigloides isolate Mad4 16S ribosomal RNA gene, partial sequence; mitochondrial.
664729312238437 0.888Parablennius sanguinolentus isolate 1 12S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product.
77111239239 1.000Lipophrys pholis microsatellite 2-9 sequence.
88111274274 1.000Lipophrys pholis microsatellite 3-7 sequence.
99111306306 1.000Lipophrys pholis microsatellite 6-6 sequence.
1010111163163 1.000Lipophrys pholis microsatellite 7-3 sequence.
1111111198198 1.000Lipophrys pholis microsatellite 6-5 sequence.
12126022423541655 0.964Scartella sp. BOLD:AAB0580 voucher SMSA7456 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial.
1313404115317333 0.984Ecsenius bicolor histone (H3) gene, partial cds.
14144040158551491 0.987Praealticus striatus voucher ASIZP 0800872 recombination activating protein 1 (Rag1) gene, partial cds.
1515313211346464 0.871Salarias fasciatus TMO-4c4 gene, partial sequence.
1616886380387 0.989Ophioblennius steindachneri 12S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence.
171741136301155 0.627Salaria fluviatilis tRNA-Glu gene, partial sequence; and cytochrome b (cytb) gene, partial cds; mitochondrial.
18181341315319 0.996Ophioblennius steindachneri haplotype 16 mitochondrial D-loop, partial sequence.
1919111843843 1.000Ophioblennius atlanticus glycosyltransferase (glyt) gene, partial cds.
2020222795801 0.996Ophioblennius atlanticus ectodermal-neural cortex 1-like protein (ENC1) gene, partial cds.
2121111822822 1.000Ophioblennius atlanticus zic family member protein (zic1) gene, partial cds.
2222333633688 0.952Salaria fluviatilis T-box brain 1 (tbr1) gene, partial cds.
2323111672672 1.000Ophioblennius atlanticus pleiomorphic adenoma protein-like 2 protein (plagl2) gene, partial cds.
2424111705705 1.000Ophioblennius atlanticus SH3 and PX3 domain-containing 3-like protein (SH3PX3) gene, partial cds.
2525333467788 0.835Coryphoblennius galerita cardiac muscle myosin heavy chain 6 alpha gene, partial cds.
2626111912912 1.000Ophioblennius atlanticus brain super conserved receptor (sreb2) gene, partial cds.
2727333583737 0.915Salaria fluviatilis hypothetical protein LOC564097 (Ptr) gene, partial cds.
2828111511511 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA8.
2929111340340 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA9.
3030111579579 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA10.
3131111429429 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA20.
3232111325325 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA23.
3333111432432 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA24.
3434111249249 1.000Ophioblennius atlanticus microsatellite DNA, locus OAA25.
3535222661672 0.992Salarias fasciatus 28S ribosomal RNA gene, partial sequence.
3636111585585 1.000Ecsenius bicolor 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial.
37372881420734 0.757Parablennius sanguinolentus clone PSIT mitochondrial D-loop, partial sequence.
3838111359359 1.000Parablennius sanguinolentus cytochrome b gene, partial cds; mitochondrial.
3939221705707 0.999Parablennius tentacularis mitochondrial D-loop, partial sequence.
4040111713713 1.000Parablennius gattorugine interphotoreceptor retinoid-binding protein (IRBP2) gene, exon 1 and partial cds.
4141111985985 1.000Parablennius gattorugine RNF213 (RNF213) gene, partial cds.
4242111308308 1.000Parablennius gattorugine 28S ribosomal RNA gene, partial sequence.
4343111130130 1.000Parablennius gattorugine 28S ribosomal RNA gene, partial sequence.
4444111125125 1.000Parablennius gattorugine 28S ribosomal RNA gene, partial sequence.
4545111245245 1.000Parablennius gattorugine 28S ribosomal RNA gene, partial sequence.
4646111536536 1.000Parablennius gattorugine mixed-lineage leukemia-like protein (MLL) gene, exon 26 and partial cds.
4747111706706 1.000Parablennius ruber mitochondrial D-loop, partial sequence.
4848111729729 1.000Parablennius rouxi partial 18S rRNA gene.
4949111772772 1.000Parablennius rouxi mitochondrial 12S rRNA gene (partial), tRNA-Val gene and 16S rRNA gene (partial), isolate Blanes.
5050111284284 1.000Parablennius pilicornis clone Ppil2 microsatellite sequence.
5151111413413 1.000Parablennius pilicornis clone Ppil18 microsatellite sequence.
5252111686686 1.000Parablennius pilicornis clone Ppil27 microsatellite sequence.
5353111608608 1.000Parablennius pilicornis clone Ppil33 microsatellite sequence.
5454111221221 1.000Parablennius pilicornis mitochondrial D-loop, partial sequence.
5555111146146 1.000Salarias sp. growth hormone (GH) gene, partial cds.
5656111189189 1.000Salarias sp. isolate MhcIIagoby MHC class II antigen gene, partial cds.
5757111189189 1.000Salarias sp. isolate MhcIIbgoby MHC class II antigen gene, partial cds.
5858111843843 1.000Salarias sp. mixed lineage leukemia-like protein (Mll) gene, partial cds.
5959111475475 1.000Salarias sp. isolate RAG1aBlenny RAG1 protein (RAG1) gene, partial cds.
606011110181018 1.000Salarias sp. isolate RAG1bBlenny RAG1 protein (RAG1) gene, partial cds.
616111111001100 1.000Salarias sp. dystrophin (Dyst) gene, partial cds.
626211091269774 0.594Coryphoblennius galerita mitochondrial D-loop, partial sequence.
6363222674674 1.000Salaria fluviatilis NADH dehydrogenase subunit 4 gene, partial cds; mitochondrial.
6464111153153 1.000Coryphoblennius galerita mitochondrial D-loop, partial sequence.
656511981297451 0.703Salaria pavo voucher SAPAGR2 control region, partial sequence; mitochondrial.
6666111366366 1.000Salaria pavo partial 18S rRNA gene.
6767111397397 1.000Salaria pavo partial mRNA for P450 aromatase (CYP19B gene).
6868111683683 1.000Salarias fasciatus voucher SSFA1 S7 ribosomal protein gene, intron 1.
69691117272 1.000Salarias fasciatus tRNA-Val gene, complete sequence; mitochondrial.
7070111535535 1.000Salarias fasciatus 16S large subunit ribosomal RNA gene, partial sequence; mitochondrial.
7171111154154 1.000Aidablennius sphynx clone Asph83 microsatellite sequence.
72722321359428 0.958Salaria fluviatilis voucher SF208 control region, partial sequence; mitochondrial.
7373111296296 1.000Salaria fluviatilis microsatellite SfL01 sequence.
7474111281281 1.000Salaria fluviatilis microsatellite SfL05 sequence.
7575111267267 1.000Salaria fluviatilis microsatellite SfL07 sequence.
7676111338338 1.000Salaria fluviatilis microsatellite SfM01 sequence.
7777111234234 1.000Salaria fluviatilis microsatellite SfM04 sequence.
7878111373373 1.000Salaria fluviatilis microsatellite SfM11 sequence.
7979111172172 1.000Salaria fluviatilis microsatellite SfS02 sequence.
8080111285285 1.000Salaria fluviatilis microsatellite SfS03 sequence.
8181111310310 1.000Salaria fluviatilis microsatellite SfS07 sequence.
82821119999 1.000Salaria fluviatilis microsatellite SfS09 sequence.
8383111757757 1.000Istiblennius dussumieri voucher KU 4801 recombination activating protein 1 (Rag1) gene, partial cds.
8484111231231 1.000Lipophrys adriaticus mitochondrial D-loop, partial sequence.
8585111477477 1.000Lipophrys canevae mitochondrial D-loop, partial sequence.
8686111246246 1.000Lipophrys dalmatinus mitochondrial D-loop, partial sequence.
8787111709709 1.000Lipophrys caboverdensis mitochondrial D-loop, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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