Cluster set at subtree whose root is Oxymonadida (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-614410011544 0.731Monocercomonoides sp. PA clone 1/2 translation elongation factor-1 alpha mRNA, complete cds.
1-2952418862158 0.926Oxymonas sp. NcOxA gene for small subunit ribosomal RNA, partial sequence.
2-342460573 0.901Symbiotic protist of Reticulitermes speratus RsSmRab1_4 mRNA for Small G Protein RAB, partial cds.
3-2102552562 0.995Pyrsonympha grandis RsSmRab32_3 mRNA for Small G Protein RAB, partial cds.
4-62558971634 0.715Monocercomonoides sp. PA clone 4/4 tubulin alpha subunit mRNA, complete cds.
5-241540619 0.966Symbiotic protist of Reticulitermes speratus RsSmRab6_4 mRNA for Small G Protein RAB, partial cds.
6-261585590 0.994Symbiotic protist of Reticulitermes speratus RsSmRab7_8 mRNA for Small G Protein RAB, partial cds.
7-231595601 0.997Symbiotic protist of Reticulitermes speratus RsSmRab11_2 mRNA for Small G Protein RAB, partial cds.
8-111285285 1.000Oxymonas sp. JF2002 partial 18S rRNA gene.
9-13124042670 0.937Streblomastix strix PPDK gene, partial cds.
10-111962962 1.000Streblomastix strix conserved hypothetical protein gene, complete cds.
11-111486486 1.000Streblomastix strix nuclear transport factor 2 (NTF2) gene, complete cds.
12-111769769 1.000Streblomastix strix large subunit ribosomal protein 9 RPS9 (rps9) gene, partial cds.
13-11110611061 1.000Streblomastix strix cathepsin B (cathB1) gene, partial cds.
14-111553553 1.000Streblomastix strix RPL21 (rpl21) gene, complete cds.
15-11114411441 1.000Streblomastix strix NAD-dependent glutamate dehydrogenase gene, complete cds.
16-111570570 1.000Streblomastix strix small subunit ribosomal protein 7 (rps7) gene, complete cds.
17-111676676 1.000Streblomastix strix RPL18 (rpl18) gene, partial cds.
18-111505505 1.000Streblomastix strix cyclophilin gene, partial cds.
19-38211201461 0.842Monocercomonoides sp. PA clone 1/1 tubulin beta subunit mRNA, complete cds.
20-11112431243 1.000Streblomastix strix cathepsin B gene, partial cds.
21-11113021302 1.000Streblomastix strix UAP56/BAT1 gene, partial cds.
22-111831831 1.000Streblomastix strix UPF1 gene, partial cds.
23-11114751475 1.000Streblomastix strix RPL4 gene, partial cds.
24-15110811696 0.854Streblomastix strix clone 1 heat shock protein 90 gene, partial cds.
25-151767775 0.997Streblomastix strix clone 4 beta-tubulin mRNA, partial cds.
26-131438529 0.929Streblomastix strix clone 2 elongation factor-1 alpha mRNA, partial cds.
27-1318531281 0.778Streblomastix strix clone 1 heat shock protein 90 mRNA, partial cds.
28-12124272427 1.000Streblomastix strix clone 2 small subunit ribosomal RNA gene, partial sequence.
29-131981993 0.996Monocercomonoides sp. PA cathepsin B2 cysteine protease (CPB2) mRNA, complete cds.
30-11110141014 1.000Monocercomonoides sp. PA cathepsin B4 cysteine protease (CPB4) mRNA, complete cds.
31-11110321032 1.000Monocercomonoides sp. PA cathepsin B5 cysteine protease (CPB5) mRNA, complete cds.
32-11110031003 1.000Monocercomonoides sp. PA cathepsin B6 cysteine protease (CPB6) mRNA, complete cds.
33-1219951020 0.988Monocercomonoides sp. PA cathepsin B8 cysteine protease (CPB8) mRNA, partial cds.
34-11114501450 1.000Monocercomonoides sp. PA cathepsin B9 cysteine protease (CPB9) mRNA, partial cds.
35-11116981698 1.000Monocercomonoides sp. PA cathepsin B10 cysteine protease (CPB10) mRNA, complete cds.
36-11114271427 1.000Monocercomonoides sp. PA cathepsin B11 cysteine protease (CPB11) mRNA, partial cds.
37-111777777 1.000Monocercomonoides sp. PA clone 2/2 translation elongation factor-1 alpha mRNA, partial cds.
38-22111491187 0.984Monocercomonoides sp. PA203 glyceraldehyde-3-phosphate dehydrogenase mRNA, complete cds.
39-11579579 1.000Symbiotic protist of Reticulitermes speratus RsSmRab1_5 mRNA for Small G Protein RAB, partial cds.
40-12574577 0.997Symbiotic protist of Reticulitermes speratus RsSmRab2_2 mRNA for Small G Protein RAB, partial cds.
41-11584584 1.000Symbiotic protist of Reticulitermes speratus RsSmRab5 mRNA for Small G Protein RAB, partial cds.
42-11993993 1.000Symbiotic protist of Reticulitermes speratus RsManC mRNA for beta-mannanase, partial cds.
43-11129272927 1.000Monocercomonoides sp. PA203 18S ribosomal RNA gene, partial sequence.
44-111881881 1.000Monocercomonoides sp. PA203 polyubiquitin mRNA, complete cds.
45-11116581658 1.000Monocercomonoides sp. PA203 translation elongation factor 2 mRNA, partial cds.
46-11119701970 1.000Monocercomonoides sp. PA203 tubulin gamma subunit mRNA, complete cds.
47-11122592259 1.000Monocercomonoides sp. PA203 cytosolic heat shock protein 70-like protein mRNA, complete cds.
48-11124092409 1.000Monocercomonoides sp. PA203 heat shock protein 90-like protein mRNA, complete cds.
49-11114081408 1.000Monocercomonoides sp. PA203 enolase mRNA, partial cds.
50-11111391139 1.000Monocercomonoides sp. PA203 fructose bisphosphate aldolase mRNA, partial cds.
51-11116381638 1.000Monocercomonoides sp. PA203 hexokinase 1 mRNA, complete cds.
52-11117041704 1.000Monocercomonoides sp. PA203 hexokinase 2 mRNA, partial cds.
53-11116151615 1.000Monocercomonoides sp. PA203 pyrophosphate:fructose 6-phosphate phosphotransferase mRNA, partial cds.
54-11113831383 1.000Monocercomonoides sp. PA203 phosphoglycerate kinase mRNA, complete cds.
55-11119241924 1.000Monocercomonoides sp. PA203 phosphoglycerate mutase mRNA, complete cds.
56-11117301730 1.000Monocercomonoides sp. PA203 pyruvate kinase mRNA, complete cds.
57-12127432803 0.989Monocercomonoides sp. PA203 pyruvate phosphate dikinase 1 mRNA, complete cds.
58-111898898 1.000Monocercomonoides sp. PA203 triose-phosphate isomerase mRNA, partial cds.
59-11954954 1.000Incisitermes marginipennis oxymonad symbiont clone GhImp29 partial 18S rRNA gene, clone GhImp29.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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