Cluster set at subtree whose root is Profelis (rel. 194)

Click to see complete taxon coverage matrix or taxon coverage by genus (very large matrices may load slowly!).
Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
00111375375 1.000Profelis aurata 16S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence.
1118111318318 1.000Profelis aurata NADH dehydrogenase subunit 5 gene, partial cds; mitochondrial.
2412111611181 0.992Profelis aurata strain pauX zinc finger protein Zfx (Zfx) gene, partial cds.
313111835835 1.000Profelis aurata Smcy gene, intron 4, complete sequence.
414111958958 1.000Profelis aurata Ube1y gene, exon 18 and partial cds.
515111730730 1.000Profelis aurata Zfy gene, intron.
617111639639 1.000Profelis aurata APP gene, partial sequence.
760111821821 1.000Profelis aurata CALB gene, partial sequence.
818111326326 1.000Profelis aurata CHRNA1 gene, partial sequence.
91911113591359 1.000Profelis aurata CLU gene, partial sequence.
1020111518518 1.000Profelis aurata CMA1 (CMA1) gene, partial cds.
1121111706706 1.000Profelis aurata DGKG2 gene, partial sequence.
1222111411411 1.000Profelis aurata FES gene, partial sequence.
1323111441441 1.000Profelis aurata GATA3 gene, partial sequence.
1424111670670 1.000Profelis aurata GHR (GHR) gene, partial cds.
1525111622622 1.000Profelis aurata GNAZ (GNAZ) gene, partial cds.
1661111573573 1.000Profelis aurata GNB1 gene, partial sequence.
1726111349349 1.000Profelis aurata HK1 gene, partial sequence.
1827111296296 1.000Profelis aurata NCL (NCL) gene, partial cds.
1928111290290 1.000Profelis aurata PNOC (PNOC) gene, partial cds.
2029111473473 1.000Profelis aurata RAG2 (RAG2) gene, partial cds.
2130111548548 1.000Profelis aurata RSA2 gene, partial sequence.
2231111371371 1.000Profelis aurata SIL gene, partial sequence.
2332111590590 1.000Profelis aurata TCP1 (TCP1) gene, partial cds.
241111885885 1.000Profelis aurata TTR gene, partial sequence.
2533111319319 1.000Profelis aurata ALAS gene, partial sequence.
2634111670670 1.000Profelis aurata ATP-7A (ATP7A) gene, partial cds.
2735111318318 1.000Profelis aurata IL2RG (IL2RG) gene, partial cds.
2836111899899 1.000Profelis aurata PLP gene, partial sequence.
2937111844844 1.000Profelis aurata isolate Pau1 ZFX gene, intron.
303811127622762 1.000Profelis aurata sex-determining region Y protein (SRY) gene, complete cds.
31111111406406 1.000Profelis aurata UDP-glucuronosyltransferase 1A1 (UGT1A1) gene, exon 1 and partial cds.
32112111850850 1.000Profelis aurata UDP-glucuronosyltransferase 1A6 (UGT1A6) pseudogene, exon 1.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


Back to taxonomic hierarchy view