Cluster set at subtree whose root is Herpailurus (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
00121375383 0.990Herpailurus yaguarondi 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product.
1118121318318 1.000Herpailurus yaguarondi NADH dehydrogenase 5 gene, partial cds; mitochondrial gene for mitochondrial product.
26111191191 1.000Herpailurus yaguarondi ATPase 8 gene, partial cds; mitochondrial gene for mitochondrial product.
3412111781181 0.999Herpailurus yaguarondi strain hyaX zinc finger protein Zfx (Zfx) gene, partial cds.
413111840840 1.000Herpailurus yaguarondi Smcy gene, intron 4, complete sequence.
5182121930954 0.987Herpailurus yaguarondi melanocortin-1 receptor (MC1R) gene, complete cds.
615111728728 1.000Herpailurus yaguarondi Zfy gene, intron.
78121165307 0.769Herpailurus yaguarondi isolate Hy cytochrome b gene, partial cds; mitochondrial.
817111642642 1.000Herpailurus yaguarondi APP gene, partial sequence.
960111817817 1.000Herpailurus yaguarondi CALB gene, partial sequence.
1018111326326 1.000Herpailurus yaguarondi CHRNA1 gene, partial sequence.
111911113701370 1.000Herpailurus yaguarondi CLU gene, partial sequence.
1220111518518 1.000Herpailurus yaguarondi CMA1 (CMA1) gene, partial cds.
1321111702702 1.000Herpailurus yaguarondi DGKG2 gene, partial sequence.
1422111412412 1.000Herpailurus yaguarondi FES gene, partial sequence.
1523111441441 1.000Herpailurus yaguarondi GATA3 gene, partial sequence.
1624111670670 1.000Herpailurus yaguarondi GHR (GHR) gene, partial cds.
1725111622622 1.000Herpailurus yaguarondi GNAZ (GNAZ) gene, partial cds.
1861111674674 1.000Herpailurus yaguarondi GNB1 gene, partial sequence.
1926111349349 1.000Herpailurus yaguarondi HK1 gene, partial sequence.
2027111296296 1.000Herpailurus yaguarondi NCL (NCL) gene, partial cds.
2128111290290 1.000Herpailurus yaguarondi PNOC (PNOC) gene, partial cds.
2229111473473 1.000Herpailurus yaguarondi RAG2 (RAG2) gene, partial cds.
2330111551551 1.000Herpailurus yaguarondi RSA2 gene, partial sequence.
2431111371371 1.000Herpailurus yaguarondi SIL gene, partial sequence.
2532111590590 1.000Herpailurus yaguarondi TCP1 (TCP1) gene, partial cds.
261111885885 1.000Herpailurus yaguarondi TTR gene, partial sequence.
2733111512512 1.000Herpailurus yaguarondi ALAS gene, partial sequence.
2834111670670 1.000Herpailurus yaguarondi ATP-7A (ATP7A) gene, partial cds.
2935111318318 1.000Herpailurus yaguarondi IL2RG (IL2RG) gene, partial cds.
3036111899899 1.000Herpailurus yaguarondi PLP gene, partial sequence.
3137111830830 1.000Herpailurus yaguarondi isolate Hya17 ZFX gene, intron.
323811127652765 1.000Herpailurus yaguarondi sex-determining region Y protein (SRY) gene, complete cds.
33118111159159 1.000Herpailurus yaguarondi isolate ZJRC08 NADH dehydrogenase subunit 5 (ND5) gene, partial cds; mitochondrial.
3418311114731473 1.000Herpailurus yaguarondi thiamine transport protein 1 (SLC19A2) mRNA, complete cds.
358311166376637 1.000Herpailurus yaguarondi clone PYA1 carboxylesterase 7-like gene, complete sequence.
361112110841096 0.995Herpailurus yaguarondi isolate Heya03 cytochrome b (cytb) gene, partial cds; mitochondrial.
371211101327437 0.937Herpailurus yaguarondi isolate J10 control region, partial sequence; mitochondrial.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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