Cluster set at subtree whose root is Hexactinellida (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
06246473311502006 0.927Rhabdocalyptus dawsoni 18S ribosomal RNA gene, complete sequence.
16645453311021320 0.925Sericolophus hawaiicus partial 28S rRNA gene, isolated from USA.
265111747747 1.000Sympagella nux 28S rRNA gene.
36211110791079 1.000Sympagella nux 18S rRNA gene.
473133212401299 0.982Aphrocallistes beatrix protoflagellar creatine kinase (ProtoflgCK) mRNA, complete cds.
573211113441344 1.000Vazella pourtalesi mitochondrial creatine kinase (MtCK) mRNA, complete cds; nuclear gene for mitochondrial product.
6747577636413568 0.873Heterochone calyx mitochondrial partial 16S rRNA gene.
704957333571283 0.747Docosaccus sp. GW5429 mitochondrial partial COI gene for cytochrome oxidase subunit 1, specimen voucher GW5429.
8740222630633 0.998Acanthascus dawsoni triosephosphate isomerase (TPI) mRNA, partial cds.
9741111447447 1.000Acanthascus dawsoni phosphofructokinase (PFK) mRNA, partial cds.
10742111903903 1.000Acanthascus dawsoni methionine adenosyltransferase (MAT) mRNA, partial cds.
1123111795795 1.000Acanthascus dawsoni elongation factor 1 alpha (EF1a) mRNA, partial cds.
126955510501281 0.933Hertwigia falcifera ATP synthase beta chain (ATPB) mRNA, partial cds.
13743444792792 1.000Aphrocallistes vastus catalase (Cat) mRNA, partial cds.
1474411122512251 1.000Rhabdocalyptus dawsoni mRNA for serine/threonine protein kinase.
1574511121172117 1.000Rhabdocalyptus dawsoni HSP70-1 gene.
1674633312451401 0.962Rhabdocalyptus dawsoni heat-shock protein Hsp70 mRNA, partial cds.
176611138243824 1.000Rhabdocalyptus dawsoni 28S large subunit ribosomal RNA gene, partial sequence.
18748111114114 1.000Rhabdocalyptus dawsoni homeobox protein sine oculis six 1/2 gene, partial cds.
19758111957957 1.000Rossella nodastrella methionine adenosyltransferase (MAT) mRNA, partial cds.
20753222891897 0.997Rossella nodastrella elongation factor 1 alpha (EF1alpha) mRNA, partial cds.
2175911116941694 1.000Crateromorpha meyeri mRNA for cryptochrome (crypto gene).
22760121603691 0.936Crateromorpha meyeri partial mRNA for cathepsin-like protein 1 (cathl1 gene).
23761111438438 1.000Crateromorpha meyeri partial mRNA for cathepsin-like protein 2 (cathl2 gene).
24762111367367 1.000Crateromorpha meyeri mRNA for cathepsin-like protein 3 (cathl3 gene).
25763111982982 1.000Crateromorpha meyeri partial mRNA for cathepsin-like protein 4 (cathl4 gene).
26764111475475 1.000Crateromorpha meyeri partial mRNA for silicatein (silcacr gene).
27765111936936 1.000Caulophacus arcticus partial alg11 gene for aspargine-linked glycosylation 11 protein, specimen voucher SM:Janussen SMF 10520.
28749786428534 0.931Hyalonema sp. HBOI 23-VIII-93-4-001 partial 28S rRNA gene, isolated from Jamaica.
2976611112961296 1.000Aulosaccus sp. GV-2009 silicatein-like protein mRNA, complete cds.
30750222555571 0.986Bathydorus sp. GV-2009 cathepsin L1 mRNA, partial cds.
31767111249249 1.000Aulosaccus sp. GV-2009 cathepsin L2 mRNA, partial cds.
32751111451451 1.000Bathydorus sp. GV-2009 cathepsin L2 mRNA, partial cds.
33752111522522 1.000Bathydorus sp. SB-2012 phosphofructokinase (PFK) mRNA, partial cds.
34772111474474 1.000Aphrocallistes vastus isolate TOA4 cell division control protein 42 mRNA, partial cds.
35773111343343 1.000Aphrocallistes vastus isolate TOA5 Ras-related nuclear protein mRNA, partial cds.
36774111363363 1.000Aphrocallistes vastus isolate TOA6 eukaryotic translation initiation factor 2 mRNA, partial cds.
37775111991991 1.000Aphrocallistes vastus isolate TOA10 endoplasmic reticulum heat shock 70 kDa protein mRNA, partial cds.
38776111999999 1.000Aphrocallistes vastus isolate TOA11 mitochondrial heat shock 70 kDa protein mRNA, partial cds; nuclear gene for mitochondrial product.
39777111288288 1.000Aphrocallistes vastus isolate TOA13 succinate dehydrogenase iron-sulfur protein mRNA, partial cds.
4077811110951095 1.000Aphrocallistes vastus isolate TOA15 DNA-directed RNA polymerase II largest subunit mRNA, partial cds.
41779111762762 1.000Aphrocallistes vastus isolate TOA16 DNA-directed RNA polymerase II largest subunit mRNA, partial cds.
42780111390390 1.000Aphrocallistes vastus isolate TOA21 ribosomal protein 5 large subunit mRNA, partial cds.
43781111351351 1.000Aphrocallistes vastus isolate TOA25 ribosomal protein 2 small subunit mRNA, partial cds.
44782111483483 1.000Aphrocallistes vastus isolate TOA33 actin-related protein Arp2/3 complex subunit ARPC2 mRNA, partial cds.
4578311112901290 1.000Aphrocallistes vastus isolate TOA36 SNF2 family DNA-dependent ATPase domain-containing protein mRNA, partial cds.
46784111723723 1.000Aphrocallistes vastus isolate TOA39 glutamyl-tRNA synthetase mRNA, partial cds.
47785111576576 1.000Aphrocallistes vastus isolate TOA40 phenylalanyl-tRNA synthetase beta subunit mRNA, partial cds.
4878611110931093 1.000Aphrocallistes vastus isolate TOA44 RNA polymerase I large subunit mRNA, partial cds.
49787111802802 1.000Aphrocallistes vastus isolate TOA45 RNA polymerase I large subunit mRNA, partial cds.
50788111700700 1.000Aphrocallistes vastus isolate TOA47 RNA polymerase III second largest subunit mRNA, partial cds.
51789111716716 1.000Aphrocallistes vastus isolate TOA48 RNA polymerase III second largest subunit mRNA, partial cds.
5279011112391239 1.000Aphrocallistes vastus isolate TOA51 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH mRNA, partial cds.
53791111816816 1.000Aphrocallistes vastus isolate TOA53 DNA replication licensing factor MCM7 component mRNA, partial cds.
5479211110381038 1.000Aphrocallistes vastus isolate TOA56 chaperonin complex component TCP-1 delta subunit mRNA, partial cds.
55793111798798 1.000Aphrocallistes vastus isolate TOA57 chaperonin complex component TCP-1 beta subunit mRNA, partial cds.
56794111949949 1.000Aphrocallistes vastus isolate TOA59 P-type ATPase mRNA, partial cds.
57795111666666 1.000Aphrocallistes vastus isolate TOA62 ATPase alpha-subunit mRNA, partial cds.
58796111633633 1.000Aphrocallistes vastus triosephosphate isomerase (TPI) mRNA, partial cds.
59797111444444 1.000Aphrocallistes vastus phosphofructokinase (PFK) mRNA, partial cds.
60798111957957 1.000Aphrocallistes vastus methionine adenosyltransferase (MAT) mRNA, partial cds.
6179911112391239 1.000Aphrocallistes vastus elongation factor 1 alpha (EF1a) mRNA, partial cds.
62800222924936 0.994Heterochone sp. 10523 partial alg11 gene for aspargine-linked glycosylation 11 protein, specimen voucher SM:Janussen SMF 10523.
63801111480480 1.000Aphrocallistes vastus mRNA for tyrosine kinase, clone INRVA, partial.
6480212110681068 1.000Aphrocallistes vastus mRNA for putative multidrug resistance protein (pohl gene).
65803121814899 0.953Aphrocallistes vastus mRNA for LECC1 protein.
66804111846846 1.000Aphrocallistes vastus partial mRNA for aspartate protease (app gene).
6780511118221822 1.000Aphrocallistes vastus mRNA for photolyase related protein (phr gene).
6880616111201282 0.971Aphrocallistes vastus 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, specimen voucher UCMPWC879, clone 2.
6980711113331333 1.000Aphrocallistes vastus mRNA for cathepsin L (catl gene).
7080811126252625 1.000Aphrocallistes vastus mRNA for collagen (col gene).
7180911111461146 1.000Aphrocallistes vastus alpha-tubulin mRNA, partial cds.
7281011111761176 1.000Aphrocallistes vastus beta-tubulin mRNA, partial cds.
73811111756756 1.000Aphrocallistes vastus elongation factor 2 mRNA, partial cds.
7481211118541854 1.000Aphrocallistes vastus 90-kDa heat-shock protein (hsp90) mRNA, partial cds.
75754111725725 1.000Oopsacas minuta ribosomal protein S5 (rps5) gene, partial cds.
76755111357357 1.000Oopsacas minuta partial 28S rRNA gene.
77756111430430 1.000Oopsacas minuta brachyury (Bra) mRNA, partial cds.
7881311113541354 1.000Aphrocallistes beatrix arginine kinase (AK) mRNA, complete cds.
7981411114111411 1.000Aphrocallistes beatrix mitochondrial creatine kinase (MtCK) mRNA, complete cds; nuclear gene for mitochondrial product.
80757111936936 1.000Walteria leuckarti partial alg11 gene for aspargine-linked glycosylation 11 protein, specimen voucher SM:Janussen SMF 10522.
81768111561561 1.000Euplectella aspergillum partial mRNA for silicatein (silca-cDNA gene).
82769111537537 1.000Hertwigia falcifera phosphofructokinase (PFK) mRNA, partial cds.
83770111486486 1.000Hertwigia falcifera methionine adenosyltransferase (MAT) mRNA, partial cds.
84771111633633 1.000Hertwigia falcifera triose phosphate isomerase (TPI) mRNA, partial cds.
85589121763848 0.950Semperella schultzei 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, specimen voucher QMG318598, clone 1.
86815222595601 0.995Hyalonema sp. USNM 1122180 mitochondrial partial COI gene for cytochrome oxidase subunit 1, specimen voucher USNM 1122180.
87819111378378 1.000Monorhaphis chuni partial mRNA for silicatein (silca gene).
8881611113061306 1.000Pheronema raphanus cathepsin L 1 mRNA, complete cds.
8981711111711171 1.000Pheronema raphanus cathepsin L 2 mRNA, complete cds.
9081811110701070 1.000Pheronema raphanus proteasome subunit beta type mRNA, complete cds.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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