Cluster set at subtree whose root is Heterolobosea (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
12-2153201279524 0.741Naegleria chilensis 18S, 5.8S and 23S rRNA gene and ITS 1 and 2, strain NG946.
13-10814893193605 0.425Acrasis helenhemmesae strain AusBG-8-1 18S small subunit ribosomal RNA gene, partial sequence.
20-47410971467 0.895Naegleria gruberi gene for alpha-tubulin (3).
21-1419113051324 0.991Naegleria sp. NG055 partial group I intron containing ORF1 DNA for hypothetical protein, isolate NG055.
22-6748842321 0.566N.gruberi NbetaT1 gene encoding beta-tubulin.
36-57114751508 0.990Naegleria fowleri isolate 7845 small subunit ribosomal RNA gene, partial sequence; mitochondrial.
84-551508665 0.897Naegleria arctica 5.8S rRNA gene, ITS1 and ITS2, isolate SP5.
91-441198209 0.974Naegleria sp. NG332 group I like ribozyme GIR1, strain NG332.
94-11132398561 0.916Learamoeba sp. RLA457 genes for ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence.
96-553512535 0.977Tetramitus lobospinosus ITS1, 5.8S rRNA gene and ITS2, type strain ATCC30298T.
101-581316347 0.967Vahlkampfia ciguana ITS1, 5.8S rRNA gene and ITS2.
102-474621666 0.959Singhamoeba horticola clone CF2-102 18S ribosomal RNA gene, partial sequence.
106-66118762371 0.834Heterolobosea sp. FUM1 18S rRNA gene, strain FUM1.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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