Cluster set at subtree whose root is Parabasalia (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-1945149091492 0.760Holomastigotoides mirabile atub mRNA for alpha tubulin, partial cds.
1-273453512972046 0.698Tritrichomonas foetus 18S, 5.8S, and 28S ribosomal RNA genes.
2-1181270339 0.904Pentatrichomonas hominis putative rRNA small subunit gene, partial sequence, putative internal transcribed spacer 1, putative 5.8S rRNA gene, and putative internal transcribed spacer 2, complete sequence, and putative rRNA large subunit gene, partial sequence. sequences.
3-11151665166 1.000Pentatrichomonas hominis strain Hs-3:NIH RNA polymerase II largest subunit (Rpb1) gene, complete cds.
4-2969207791368 0.672Histomonas meleagridis partial mRNA for putative elongation factor 1-alpha (tef1 gene), clone 79a/1.
5-111408408 1.000Pentatrichomonas hominis isolate Hs3:NIH elongation factor 1 alpha (EF1-alpha-Ph2) gene, partial cds.
6-3439731100 0.932Pentatrichomonas hominis isolate Hs3:NIH glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, complete cds.
7-11116681668 1.000Pentatrichomonas hominis isolate Hs3:NIH mismatch repair protein (Pms1) gene, partial cds.
8-5547079 0.965Pentatrichomonas hominis 28S ribosomal RNA.
9-887176200 0.931Monocercomonas sp. 28S ribosomal RNA.
10-222291341 0.927Pentatrichomonas hominis 28S ribosomal RNA.
11-4439701246 0.844Trichomonas tenax putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
12-111975975 1.000Pentatrichomonas hominis putative lactate dehydrogenase (LDH) mRNA, partial cds.
13-3781288411190 0.780Holomastigotoides mirabile mRNA for actin, complete cds, clone: 06A34.
14-11112191219 1.000Tetratrichomonas gallinarum strain 4114-C5/05 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
15-111153153 1.000Tetratrichomonas gallinarum small subunit ribosomal RNA gene, partial sequence.
16-632784129489 0.721Tetratrichomonas prowazeki strain SL small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.
17-7765961 0.993Tritrichomonas augusta 28S ribosomal RNA.
18-232375375 1.000T.gallinarum sod gene.
19-35210141449 0.803Trichomonas tenax lactate dehydrogenase (LDH) mRNA, partial cds.
20-222637637 1.000Tetratrichomonas gallinarum class II fumarase gene, partial cds.
21-111991991 1.000Tetratrichomonas gallinarum strain A6 enolase gene, partial cds.
22-13231311202009 0.633Histomonas meleagridis serine/threonine phosphotase and beta-tubulin 2 genes, partial cds.
23-11112481248 1.000Pseudotrichomonas keilini strain NY0170 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
24-12122832286 0.999Trichomonas tenax gene for elongation factor 2, partial cds, clone:Tef2-2.
25-111307307 1.000Trichomonas tenax 5S ribosomal RNA type A gene, complete sequence; and 5S ribosomal RNA intergenic spacer, partial sequence.
26-111316316 1.000Trichomonas tenax 5S ribosomal RNA type B gene, complete sequence; and 5S ribosomal RNA intergenic spacer, partial sequence.
27-410130195266 0.621Trichomonas sp. RWG-2007-2 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
28-11116611661 1.000Trichomonas tenax strain Hs-4:NIH RNA polymerase I largest subunit (Rpa1) gene, partial cds.
29-22114881598 0.966Trichomonas tenax isolate Hs4:NIH mismatch repair protein (Pms1) gene, partial cds.
30-24128443468 0.940Trichomonas tenax strain Hs-4:NIH glycogen phosphorylase mRNA, complete cds.
31-3516651044 0.870Trichomonas sp. RWG-2007-1 isolate M9 alpha-tubulin gene, partial cds.
32-111149149 1.000Trichomonas gallinae 18S ribosomal RNA gene, partial sequence.
33-111787787 1.000Trichomonas gallinae partial TgCP1 gene for Clan CA, family C1, cathepsin L-like cysteine peptidase.
34-111778778 1.000Trichomonas gallinae partial TgCP2 gene for Clan CA, family C1, cathepsin L-like cysteine peptidase.
35-241784953 0.920Trichomonas gallinae partial TgCP4 gene for Clan CA, family C1, cathepsin L-like cysteine peptidase.
36-21119011848 0.565Trichomonas gallinae [Fe]-hydrogenase gene, partial cds.
37-121124139 0.946Trichomonas gallinae isolate 966-08 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence.
38-151100143 0.920Trichomonas gallinae isolate St. Kits 20 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence.
39-221917951 0.982Trichomonas gallinae hydrogenosomal carrier protein (Hmp31) gene, partial cds.
40-11129942994 1.000Trichomonas sp. RWG-2007-1 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
41-111372372 1.000Trichomonas sp. Tri-Iran 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
42-11349349 1.000Trichomonadida sp. mockingbird/California/2008 5.8S ribosomal RNA, partial sequence.
43-11338338 1.000Hypotrichomonadidae sp. KANEK 16S-like ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S-like ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S-like ribosomal RNA gene, partial sequence.
44-8928501128 0.870Trichonympha agilis gapdh mRNA for glyceraldehyde-3-phosphate dehydrogenase, complete cds.
45-11115271527 1.000Trichonympha agilis eno mRNA for enolase, complete cds.
46-131510510 1.000Trichonympha agilis RsSmRab7_6 mRNA for Small G Protein RAB, partial cds.
47-101568381152 0.950Eucomonympha sp. HsEE2 gene for elongation factor-1 alpha, partial cds, clone: HsEE2.
48-16334337 0.999Reticulitermes speratus hindgut symbiont 130484 mRNA for family 45 cellulase homologue, clone:8, partial cds.
49-114710840 0.933Reticulitermes speratus hindgut symbiont 130484 mRNA for family 45 cellulase homologue, clone:8-44, complete cds.
50-11808808 1.000Reticulitermes speratus hindgut symbiont 130484 mRNA for family 45 cellulase homologue, clone:45-6, complete cds.
51-25110311096 0.967Holomastigotoides mirabile HmEG2 mRNA for endoglucanase 2, partial cds.
52-5512631265 0.999Zootermopsis parabasalian symbiont 30 enolase mRNA, partial cds.
53-2212611263 0.999Zootermopsis parabasalian symbiont 22 enolase mRNA, partial cds.
54-1112861286 1.000Zootermopsis parabasalian symbiont 29 enolase mRNA, partial cds.
55-1112681268 1.000Zootermopsis parabasalian symbiont 31 enolase mRNA, partial cds.
56-1111301130 1.000Reticulitermes flavipes gut symbiont cell-2 endoglucanase-type cellulase mRNA, complete cds.
57-1114271427 1.000Reticulitermes flavipes gut symbiont cell-3 exoglucanase-type cellulase mRNA, complete cds.
58-1112401240 1.000Reticulitermes flavipes gut symbiont cell-4 exoglucanase-type cellulase mRNA, complete cds.
59-1116921692 1.000Parabasalian symbiont from Zootermopsis angusticollis pyruvate phosphate dikinase (ppdk) mRNA, partial cds.
60-11019891027 0.967Pseudotrichonympha grassii PgEG1a mRNA for endoglucanase 1, complete cds.
61-15113531353 1.000Pseudotrichonympha grassii PgCBH-homo2c mRNA for cellulase, complete cds.
62-11110911091 1.000Pseudotrichonympha grassii gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
63-12112771446 0.942Pseudotrichonympha grassii eno2 mRNA for enolase, partial cds.
64-11116711671 1.000Pseudotrichonympha grassii hydA2 mRNA for Fe-hydrogenase, complete cds.
65-11114171417 1.000Pseudotrichonympha grassii hydA1 mRNA for Fe-hydrogenase, complete cds.
66-111973973 1.000Spirotrichonympha leidyi CFP-eg1 mRNA for cellulase, complete cds.
67-11111261126 1.000Spirotrichonympha leidyi gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, complete cds.
68-11114471447 1.000Spirotrichonympha leidyi eno mRNA for enolase, complete cds.
69-22213921406 0.995Holomastigotoides mirabile EF 1 alpha mRNA for elongation factor-1 alpha, complete cds, clone: 01A85.
70-78114651485 0.996Trichonympha acuta small subunit ribosomal RNA gene, partial sequence.
71-22115071508 1.000Trichonympha sp. CpuTcC gene for small subunit ribosomal RNA, partial sequence.
72-22114841486 0.999Trichonympha sp. 2 PJK-2009 small subunit ribosomal RNA gene, partial sequence.
73-33210561095 0.986Eucomonympha sp. HsE15 gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
74-131983984 0.999Staurojoenina assimilis gapdh 1 mRNA for glyceraldehyde-3-phosphate dehydrogenase 1, partial cds, clone: ImSG1.
75-12110041004 1.000Eucomonympha imla gap2 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
76-331286288 0.997Tritrichomonas augusta 28S ribosomal RNA.
77-12773208507 0.664Tritrichomonas sp. AUTf isolate AUTf-5 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
78-111375375 1.000Monocercomonas sp. sod gene.
79-111655655 1.000Monocercomonas sp. class II fumarase gene, partial cds.
80-11114251425 1.000Monocercomonas sp. chaperonin subunit alpha gene, partial cds.
81-111630630 1.000Monocercomonas sp. glutamate dehydrogenase (gdh) gene, partial cds.
82-111285285 1.000Ditrichomonas honigbergii strain DR internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
83-11112571257 1.000Dientamoeba fragilis RNA polymerase II largest subunit (Rpb1) gene, partial cds.
84-4184328513 0.740Parahistomonas wenrichi isolate AL411F6 clone 3 small subunit ribosomal RNA gene, partial sequence.
85-21715031183 0.481Tritrichomonas foetus D1 putative cysteine proteinase (TFCP1) gene, complete cds.
86-2201669884 0.769Tritrichomonas foetus D1 putative cysteine proteinase (TFCP2) gene, partial cds.
87-3171273458 0.620T.foetus CP4 gene.
88-3211361465 0.787T.foetus CP5 gene.
89-3171318456 0.715T.foetus CP6 gene.
90-2381373907 0.699Tritrichomonas suis isolate C19F cysteine protease 8 (CP8) gene, partial cds.
91-3171289456 0.655T.foetus CP9 gene.
92-3161562562 1.000Tritrichomonas suis isolate SUI-H3B malate dehydrogenase 1 (MDH1) gene, partial cds.
93-331502502 1.000Tritrichomonas mobilensis strain M776 TR7/TR8 PCR-amplified variable-length repeat sequence.
94-11117341734 1.000Tritrichomonas suis mRNA for calreticulin-like protein.
95-12111201121 1.000Tritrichomonas suis mRNA for 45 kDa protein containing 6 EF hand motifs, partial, clone Tf 2.2.2.
96-11117881788 1.000Monotrichomonas carabina strain QBSA-1 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
97-11111071107 1.000Holomastigotoides mirabile gap mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
98-11113021302 1.000Holomastigotoides mirabile eno mRNA for enolase, partial cds.
99-11114571457 1.000Holomastigotoides mirabile hydA1 mRNA for Fe-hydrogenase-like protein, complete cds.
100-151712792 0.949Holomastigotoides mirabile CfXyn2-2 mRNA for endo-beta-1,4-xylanase, complete cds.
101-22130573057 1.000Monocercomonas sp. ATCC 50210 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
102-221942984 0.979Monocercomonas colubrorum putative cytosolic malate dehydrogenase (MDH) mRNA, partial cds.
103-231292316 0.969Monocercomonas colubrorum strain EUMM isolate 2 16S-like ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S-like ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S-like ribosomal RNA gene, partial sequence.
104-1919295 0.979Histomonas meleagridis clone 10 internal transcribed spacer 1, complete sequence.
105-2629411348 0.786Histomonas meleagridis alpha-succinyl coenzyme A synthetase (alphaSCS) gene, complete cds.
106-11117441744 1.000Histomonas meleagridis malic enzyme (ME) gene, complete cds.
107-11113881388 1.000Histomonas meleagridis iron hydrogenase (HYD) gene, partial cds.
108-2232437457 0.960Histomonas meleagridis strain 1297 clone 4 beta-tubulin gene, partial cds.
109-494961991 0.980Trichomitus batrachorum enolase 1 gene, partial cds.
110-373967970 0.997Monocercomonas sp. glyceraldehyde-3-phosphate dehydrogenase (gap) gene, partial cds.
111-111267267 1.000Histomonas meleagridis partial mRNA for putative ribosomal protein S3 (TVAG_106800 gene), clone 3/1.
112-11122952295 1.000Histomonas meleagridis partial mRNA for putative glutaminyl tRNA synthetase family protein (TVAG_258380 gene), clone 7/1.
113-111123123 1.000Histomonas meleagridis partial mRNA for putative 60S acidic ribosomal protein P1 (TVAG_067970 gene), clone 29b/1.
114-111969969 1.000Histomonas meleagridis partial mRNA for putative ribosomal protein L10 (TVAG_006370 gene), clone 32a/1.
115-111825825 1.000Histomonas meleagridis partial mRNA for putative ribosomal protein conserved domain L4/L1 family (TVAG_476810 gene), clone 110a/1.
116-121459510 0.950Histomonas meleagridis partial mRNA for hypothetical protein, clone 175/2.
117-111516516 1.000Histomonas meleagridis partial mRNA for putative ribosomal protein L18 (TVAG_098450 gene), clone 183c/2.
118-111792792 1.000Histomonas meleagridis partial mRNA for putative ribosomal protein L8 (TVAG_371270 gene), clone 195a/2.
119-11118391839 1.000Histomonas meleagridis mRNA for putative alpha-actinin (TVAG_190450 gene), clone 9a/3.
120-11118751875 1.000Histomonas meleagridis partial mRNA for putative fimbrin (TVAG_351310 gene), clone 48/3.
121-11134083408 1.000Histomonas meleagridis mRNA for putative alpha-actinin (AACTI gene), clone 163/1.
122-11127332733 1.000Histomonas meleagridis mRNA for putative alpha-actinin (TVAG_190450 gene), clone 192/1.
123-111555555 1.000Histomonas meleagridis partial mRNA for putative hydrogenosomal oxygen reductase (TVAG_036010 gene), clone 11/2.
124-111837837 1.000Histomonas meleagridis partial mRNA for putative hydrogenosomal malic enzyme subunit A / AP65-2 adhesin (AP65-2 gene), clone 93a/2.
125-111609609 1.000Histomonas meleagridis partial mRNA for putative pyruvate:ferredoxin oxidoreductase E (TVAG_254890 gene), clone 117a/1.
126-111750750 1.000Histomonas meleagridis partial mRNA for putative cytosolic malate dehydrogenase 2 (MDH2 gene), clone 177/1.
127-111801801 1.000Histomonas meleagridis partial mRNA for putative CAMK family protein kinase (TVAG_402790 gene), clone 25a/2.
128-11119411941 1.000Histomonas meleagridis partial mRNA for putative C2 domain containing protein (TVAG_485580 gene), clone 37b/1.
129-111915915 1.000Histomonas meleagridis partial mRNA for putative CAMK family protein kinase (TVAG_032510 gene), clone 141/2.
130-111732732 1.000Histomonas meleagridis partial mRNA for putative thioredoxin reductase (TVAG_474980 gene), clone 28/1.
131-111558558 1.000Histomonas meleagridis partial mRNA for putative DJ-1 family protein (TVAG_240750 gene), clone 76b/1.
132-111582582 1.000Histomonas meleagridis partial mRNA for putative sugar isomerase domain containing protein (TVAG_011780 gene), clone 145/2.
133-11117911791 1.000Histomonas meleagridis partial mRNA for putative phosphoglucomutase/phosphomannomutase family protein (TVAG_205910 gene), clone 58c/1.
134-111612612 1.000Histomonas meleagridis partial mRNA for putative triosephosphate isomerase (TVAG_096350 gene), clone 110c/1.
135-11110141014 1.000Histomonas meleagridis partial mRNA for putative guanine nucleotide-binding protein beta subunit (TVAG_429360 gene), clone 23b/2.
136-111771771 1.000Histomonas meleagridis partial mRNA for putative ubiquitin family protein (TVAG_392980 gene), clone 10a/3.
137-111222222 1.000Histomonas meleagridis partial mRNA for putative histone 2A-IV (TVAG_105970 gene), clone 191b/1.
138-11119831983 1.000Histomonas meleagridis partial mRNA for putative AMP-binding enzyme protein (TVAG_059030 gene), clone 15c/1.
139-111981981 1.000Histomonas meleagridis partial mRNA for putative metallo-beta-lactamase superfamily III protein (TVAG_483060 gene), clone 218/1.
140-11119861986 1.000Histomonas meleagridis partial mRNA for hypothetical protein, clone 5a/3.
141-11117281728 1.000Histomonas meleagridis partial mRNA for hypothetical protein, clone 15a/2.
142-111687687 1.000Histomonas meleagridis partial mRNA for hypothetical protein, clone 97/1.
143-111462462 1.000Histomonas meleagridis partial mRNA for hypothetical protein, clone 152b/1.
144-111522522 1.000Histomonas meleagridis partial mRNA for hypothetical protein, clone 186a/1.
145-11121342134 1.000Histomonas meleagridis strain Turkey/Germany/GB 542/04 5.8 ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
146-111168168 1.000Histomonas meleagridis isolate GAPeafowl1 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
147-11111191119 1.000Histomonas meleagridis ras-related protein and beta-tubulin 1 genes, partial cds.
148-111634634 1.000Monocercomonas ATCC50210 translation initiation factor 2 gamma subunit (eIF-2 gamma) gene, partial cds.
149-111991991 1.000Monocercomonas ATCC50210 enolase 2 gene, partial cds.
150-111991991 1.000Monocercomonas ATCC50210 enolase 1 gene, partial cds.
151-111948948 1.000Tritrichomonas foetus extracellular cysteine protease 8 mRNA, complete cds.
152-1218621367 0.815Tritrichomonas foetus 5S ribosomal RNA type B gene, complete sequence.
153-1141274274 1.000Tritrichomonas foetus isolate CZ clone 4 PCR-amplified variable-length repeat, genomic sequence.
154-11138803880 1.000Tritrichomonas foetus strain KV-1 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
155-11122702270 1.000Tritrichomonas foetus isolate KV1 mismatch repair protein (Pms1) gene, complete cds.
156-111962962 1.000Tritrichomonas foetus hypoxanthine-guanine-xanthine phosphoribosyltransferase (hpt) gene, complete cds.
157-11119941994 1.000Tritrichomonas foetus inosine monophosphate dehydrogenase gene, complete cds.
158-11126962696 1.000Tritrichomonas foetus putative serine/threonine protein kinase gene, complete cds.
159-11130373037 1.000Tritrichomonas foetus putative 4-nitrophenylphosphatase and putative CDC20 genes, complete cds.
160-11123872387 1.000Tritrichomonas foetus putative protein tyrosine phosphatase, complete cds, and putative serine/threonine protein kinase genes, partial cds.
161-11164746474 1.000Tritrichomonas foetus putative fructofuranosidase genes, complete cds, and putative nucleoporin gene, partial cds.
162-11125902590 1.000Tritrichomonas foetus putative glyceraldehyde-3-phosphate dehydrogenase gene, complete cds, and putative serine/threonine protein kinase gene, partial cds.
163-11138443844 1.000Tritrichomonas foetus putative superoxide dismutase 1 (SOD1) gene, complete cds.
164-11140894089 1.000Tritrichomonas foetus putative superoxide dismutase 2 (SOD2) gene, complete cds.
165-111194194 1.000Tritrichomonas foetus translation initiation factor eIF-4A gene, partial cds.
166-111312312 1.000Tritrichomonas foetus dynein heavy chain gene, partial cds.
167-111204204 1.000Tritrichomonas foetus beta-hexosaminidase gene, partial cds.
168-11112501250 1.000Tritrichomonas foetus unknown protein gene, partial cds.
169-111471471 1.000T.foetus CP3 gene.
170-121375375 1.000T.foetus sod2 gene.
171-111970970 1.000Tritrichomonas foetus glyceraldehyde-3-phosphate dehydrogenase (gap2) gene, partial cds.
172-121998998 1.000Tritrichomonas foetus cytosolic malate dehydrogenase 2 (MDH2) mRNA, partial cds.
173-11111321132 1.000Tritrichomonas foetus class II fumarase 1 gene, partial cds.
174-111655655 1.000Tritrichomonas foetus class II fumarase 2 gene, partial cds.
175-111140140 1.000Tritrichomonas foetus succinyl CoA synthetase alpha subunit mRNA, partial cds; nuclear gene for hydrogenosomal protein.
176-111211211 1.000Tritrichomonas foetus ATP/ADP carrier mRNA, partial sequence; nuclear gene for hydrogenosomal protein.
177-111114114 1.000Tritrichomonas foetus succinyl CoA synthetase beta subunit; nuclear gene for hydrogenosomal protein.
178-111799799 1.000Tritrichomonas foetus hydrogenase mRNA, complete cds; nuclear gene for hydrogenosomal protein.
179-1119090 1.000Tritrichomonas foetus malic enzyme mRNA, partial cds; nuclear gene for hydrogenosomal protein.
180-111756756 1.000Tritrichomonas foetus pyruvate:ferredoxin oxidoreductase, partial sequence; nuclear gene for hydrogenosomal protein.
181-121284327 0.934Tritrichomonas foetus ferredoxin gene, complete cds; nuclear gene for hydrogenosomal product.
182-11146444644 1.000Tritrichomonas foetus hybrid histidine kinase (hHK) gene, complete cds.
183-11112361236 1.000Tritrichomonas foetus putative cysteine desulphurase gene, complete cds.
184-11133563356 1.000Tritrichomonas foetus strain KV1 glycogen phosphorylase gene, complete cds.
185-111170170 1.000Tritrichomonas foetus microsatellite TfRE sequence.
186-1627129421079 0.934Stephanonympha sp. Nk3 gap3 mRNA for glyceraldehyde-3-phosphate dehydrogenase, partial cds.
187-111991991 1.000Devescovina sp. Nk9 eno mRNA for enolase, partial cds.
188-11115621562 1.000Calonympha sp. WIO-2007 partial 18S rRNA gene.
189-231300300 1.000Honigbergiella sp. ATCC 50321 16S-like ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S-like ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S-like ribosomal RNA gene, partial sequence.
190-12112801281 1.000Stephanonympha sp. Nk3 eno1 mRNA for enolase, partial cds.
191-11131713171 1.000Trichomitus batrachorum strain G11 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
192-232375375 1.000H.acosta sod1 gene.
193-111973973 1.000Trichomitus batrachorum glyceraldehyde-3-phosphate dehydrogenase (gap1) gene, partial cds.
194-111970970 1.000Trichomitus batrachorum glyceraldehyde-3-phosphate dehydrogenase (gap2) gene, partial cds.
195-111988988 1.000Trichomitus batrachorum enolase 2 gene, partial cds.
196-111655655 1.000Trichomitus batrachorum class II fumarase gene, partial cds.
197-121934938 0.998Trichomitus batrachorum cytosolic malate dehydrogenase 1 mRNA, partial cds.
198-121352387 0.955Trichomitus batrachorum strain G43 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
199-11131263126 1.000Hypotrichomonas acosta strain ATCC 30070 RNA polymerase II largest subunit (Rpb1) gene, partial cds.
200-11110271027 1.000Hypotrichomonas acosta putative cytosolic malate dehydrogenase (MDH) mRNA, complete cds.
201-111977977 1.000Hypotrichomonas acosta putative lactate dehydrogenase (LDH) mRNA, complete cds.
202-111949949 1.000Hypotrichomonas acosta strain ATCC 30069 glyceraldehyde-3-phosphate dehydrogenase gene, partial cds.
203-111985985 1.000Hypotrichomonas acosta strain ATCC 30069 enolase 2 gene, partial cds.
204-331354386 0.972Hypotrichomonas sp. Morelia/307/Australia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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