Cluster set at subtree whose root is Blastocladiomycota (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
4-61436551667 0.722Blastocladiella emersonii beta-tubulin mRNA, complete cds.
5-3761109702619 0.620Coelomomyces punctatus 18S ribosomal RNA gene, partial sequence.
8-68631333625 0.891B.emersonii DNA for 28S ribosomal RNA gene.
9-555429507 0.969Coelomomyces stegomyiae isolate AFTOL-ID 18 elongation factor 1-alpha-like protein (EFL) gene, partial cds.
21-44323043203 0.911Allomyces macrogynus RNA polymerase II largest subunit (RPB1) gene, partial cds.
45-5101526727 0.888Allomyces arbuscula strain Texas 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
46-173736181065 0.847Catenaria spinosa strain WM100 28S ribosomal RNA gene, partial sequence.
51-571599701 0.910Allomyces moniliformis strain India 3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
56-672526735 0.930Catenaria sp. WM099 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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