Cluster set at subtree whose root is Blastocladiomycota (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-12137474736 0.896Blastocladiella emersonii P-Type cation-transporting ATPase (PAT2) gene, complete cds.
1-33317551832 0.980Catenaria anguillulae EF2 gene for translation elongation factor 2, partial cds, strain: PL 171.
2-121562580 0.984Blastocladiella emersonii isolate AFTOL-ID 302 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
3-222756903 0.919Blastocladiella emersonii strain CBS 56170 actin gene, partial cds.
4-61436551667 0.722Blastocladiella emersonii beta-tubulin mRNA, complete cds.
5-3761109702619 0.620Coelomomyces punctatus 18S ribosomal RNA gene, partial sequence.
6-111525525 1.000Blastocladiella emersonii centrin 1 mRNA, complete cds.
7-111504504 1.000Blastocladiella emersonii centrin 3 mRNA, complete cds.
8-68631333625 0.891B.emersonii DNA for 28S ribosomal RNA gene.
9-555429507 0.969Coelomomyces stegomyiae isolate AFTOL-ID 18 elongation factor 1-alpha-like protein (EFL) gene, partial cds.
10-11120892089 1.000Blastocladiella emersonii heat shock protein Hsp70-3 mRNA, complete cds.
11-111776776 1.000Blastocladiella emersonii heat shock protein Hsp70-2 mRNA, partial cds.
12-111716716 1.000Blastocladiella emersonii heat shock protein Hsp70-4 mRNA, partial cds.
13-111949949 1.000Blastocladiella emersonii heat shock protein Hsp70-5 mRNA, partial cds.
14-11119441944 1.000Blastocladiella emersonii heat shock protein Hsp70-6 mRNA, complete cds.
15-11117491749 1.000Blastocladiella emersonii heat shock protein Hsp70-7 mRNA, partial cds.
16-111479479 1.000Blastocladiella emersonii heat shock protein Hsp70-8 mRNA, partial cds.
17-11121112111 1.000Blastocladiella emersonii heat shock protein Hsp70-9 mRNA, complete cds.
18-11112311231 1.000Blastocladiella emersonii heat shock protein Hsp70-10 mRNA, partial cds.
19-11115421542 1.000Blastocladiella emersonii propionyl coenzyme A carboxylase mRNA, partial cds.
20-11139333933 1.000Blastocladiella emersonii heat shock protein 90 kDa (hsp90) gene, complete cds.
21-44323043203 0.911Allomyces macrogynus RNA polymerase II largest subunit (RPB1) gene, partial cds.
22-11116251625 1.000Blastocladiella emersonii elongation factor alpha-like protein mRNA, complete cds.
23-11114341434 1.000Blastocladiella emersonii enolase mRNA, complete cds.
24-111775775 1.000Blastocladiella emersonii methylmalonyl-CoA-epimerase mRNA, partial cds.
25-111693693 1.000Blastocladiella emersonii methylmalonyl-CoA-mutase mRNA, partial cds.
26-111663663 1.000Blastocladiella emersonii cob(I)alamin adenosyltransferase mRNA, partial cds.
27-111690690 1.000Blastocladiella emersonii amidohydrolase domain containing 1 protein mRNA, partial cds.
28-111764764 1.000Blastocladiella emersonii Rbj-like protein mRNA, partial cds.
29-111707707 1.000Blastocladiella emersonii putative urocanate hydratase mRNA, partial cds.
30-11124402440 1.000Blastocladiella emersonii Hsp90B mRNA, complete cds.
31-111955955 1.000Blastocladiella emersonii guanylyl cyclase 1 mRNA, partial cds.
32-11111851185 1.000Blastocladiella emersonii guanylyl cyclase 2 mRNA, partial cds.
33-111903903 1.000Blastocladiella emersonii guanylyl cyclase 3 mRNA, partial cds.
34-11114551455 1.000Blastocladiella emersonii cGMP phosphodiesterase mRNA, complete cds.
35-12113372299 0.791Blastocladiella emersonii cAMP-dependent protein kinase, complete cds.
36-11131343134 1.000Blastocladiella emersonii heat shock protein (hsp70) gene, complete cds.
37-12115642494 0.814Blastocladiella emersonii cAMP-dependent protein kinase regulatory subunit gene, complete cds.
38-11122352235 1.000Blastocladiella emersonii mitochondrial processing peptidase beta subunit 1 (BeMPP1) gene, complete cds.
39-11122732273 1.000Blastocladiella emersonii mitochondrial processing peptidase alpha subunit gene, complete cds.
40-111206206 1.000B.emersonii DNA for 5.8S ribosomal RNA gene.
41-11115081508 1.000Blastocladiella emersonii calmodulin (CaM) gene, complete cds.
42-111118118 1.000Blastocadiella simplex (water mold) 5S ribosomal RNA.
43-111504504 1.000Allomyces macrogynus alcohol dehydrogenase-like protein mRNA, partial cds.
44-34217522689 0.904Allomyces macrogynus RNA polymerase II second largest subunit (RPB2) gene, RPB2-2 allele, partial cds.
45-5101526727 0.888Allomyces arbuscula strain Texas 1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
46-173736181065 0.847Catenaria spinosa strain WM100 28S ribosomal RNA gene, partial sequence.
47-22111892707 0.720Allomyces macrogynus ATPase complex subunit 6 (atp6) gene, mitochondrial gene encoding mitochondrial protein, complete cds.
48-11147364736 1.000Allomyces macrogynus NADH dehydrogenase subunit 5 (nad5) gene, complete cds; and nad5 gene, partial cds; mitochondrial genes for mitochondrial products.
49-11117231723 1.000Allomyces macrogynus small subunit ribosomal RNA (rns) gene, mitochondrial gene encoding mitochondrial rRNA subunit, complete sequence.
50-12114121811 0.890Allomyces arbuscula mca II gene for calcium-dependent metacaspase CDP II, strain Burma 1Db.
51-571599701 0.910Allomyces moniliformis strain India 3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
52-11141414141 1.000Allomyces arbuscula mitochondrial genome, partial sequence.
53-11110111011 1.000Allomyces moniliformis lys2 gene for aminoadipate reductase, partial cds.
54-121652748 0.936Blastocladiella britannica strain Barr 214 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
55-111572572 1.000Blastocladiella britannica strain FSU 2500 18S ribosomal RNA (SSU) gene, partial sequence.
56-672526735 0.930Catenaria sp. WM099 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
57-111514514 1.000Catenaria anguillulae strain FSU 2502 18S ribosomal RNA (SSU) gene, partial sequence.
58-111639639 1.000Catenaria anguillulae strain JEL194 18S ribosomal RNA gene, partial sequence.
59-11110051005 1.000Allomyces sp. YT-TT1 RPB1 gene for DNA-dependent RNA polymerase II largest subunit, partial cds.
60-111692692 1.000Physoderma maydis isolate AFTOL-ID 19 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
61-11112321232 1.000Physoderma maydis isolate AFTOL-ID 19 elongation factor 1-alpha (EF1-alpha) gene, partial cds.
62-11123622362 1.000Physoderma maydis isolate AFTOL-ID 19 RNA polymerase II largest subunit (RPB1) gene, partial cds.
63-11121042104 1.000Physoderma maydis isolate AFTOL-ID 19 RNA polymerase II second largest subunit (RPB2) gene, partial cds.
64-111657657 1.000Microallomyces sp. CR74 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
65-11110961096 1.000Catenomyces sp. JEL342 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
66-111631631 1.000Catenaria sp. JEL 589 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
67-11120982098 1.000Coelomomyces stegomyiae isolate AFTOL-ID 18 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
68-11134863486 1.000Coelomomyces stegomyiae isolate AFTOL-ID 18 28S ribosomal RNA gene, partial sequence.
69-11116291629 1.000Coelomomyces stegomyiae isolate AFTOL-ID 18 RNA polymerase II largest subunit (RPB1) gene, partial cds.
70-12125863241 0.899Coelomomyces stegomyiae isolate AFTOL-ID 18 RNA polymerase II second largest subunit precursor (RPB2) gene, partial cds.
71-11134513451 1.000Coelomomyces stegomyiae RNA polymerase II largest subunit (RPB1) gene, partial cds.
72-22110691073 0.998Coelomycidium sp. 2 TP-2011 18S ribosomal RNA gene, partial sequence.
73-111843843 1.000Coelomycidium sp. 3 TP-2011 28S ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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