Cluster set at subtree whose root is Opisthokonta incertae sedis (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-48183263583192 0.468Rhinosporidium cygnus 18S small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
3-45429493512 0.933Amoebidium parasiticum 28S ribosomal RNA gene, partial sequence.
7-57835171255 0.706Sphaeroforma arctica translation elongation factor 1-alpha-like protein mRNA, partial cds.
8-6667951459 0.910Capsaspora owczarzaki heat shock protein 70 mRNA, partial cds.
10-41492278979 0.793Sphaeroforma sp. 2 WLM-2013 isolate MC7 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
11-6667251401 0.667Sphaeroforma arctica act gene for actin, exons 1-2.
16-5558671393 0.836Capsaspora owczarzaki translation elongation factor 1-alpha mRNA, partial cds.
53-564773948 0.919Palavascia patagonica isolate ARGD1C15 28S large subunit ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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