Cluster set at subtree whose root is Opisthokonta incertae sedis (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-48183263583192 0.468Rhinosporidium cygnus 18S small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
1-3343593915 0.704Enteromyces callianassae isolate CA12C8 18S small subunit ribosomal RNA gene, partial sequence.
2-12151634744 0.970Ichthyophonus hoferi isolate IA67 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
3-45429493512 0.933Amoebidium parasiticum 28S ribosomal RNA gene, partial sequence.
4-12115001500 1.000Psorospermium haeckeli strain 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
5-11113051305 1.000Psorospermium haeckeli strain 3 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
6-11015381782 0.590Sphaerothecum destruens strain BML 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
7-57835171255 0.706Sphaeroforma arctica translation elongation factor 1-alpha-like protein mRNA, partial cds.
8-6667951459 0.910Capsaspora owczarzaki heat shock protein 70 mRNA, partial cds.
9-232372425 0.917Sphaeroforma arctica H2B mRNA for histone H2B, complete cds.
10-41492278979 0.793Sphaeroforma sp. 2 WLM-2013 isolate MC7 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
11-6667251401 0.667Sphaeroforma arctica act gene for actin, exons 1-2.
12-111894894 1.000Corallochytrium limacisporum sterol C-14 reductase (erg-3) gene, partial cds.
13-11114851485 1.000Corallochytrium limacisporum alpha-aminoadipate reductase large subunit (lys-2) gene, partial cds.
14-11116521652 1.000Corallochytrium limacisporum heat shock protein 90 (Hsp90) gene, partial cds.
15-11113221322 1.000Corallochytrium limacisporum thymidylate synthase (TS) gene, partial cds.
16-5558671393 0.836Capsaspora owczarzaki translation elongation factor 1-alpha mRNA, partial cds.
17-2227051232 0.786Ministeria vibrans strain ATCC 50519 beta-tubulin-like mRNA, partial sequence.
18-111999999 1.000Corallochytrium limacisporum alpha-tubulin gene, partial cds.
19-111394394 1.000Capsaspora owczarzaki Rpl7A gene, partial cds.
20-111694694 1.000Capsaspora owczarzaki Shwachman-Bodian-Diamond protein-like protein mRNA, partial cds.
21-111573573 1.000Capsaspora owczarzaki beta xylosidase-like protein mRNA, partial cds.
22-11112531253 1.000Capsaspora owczarzaki MAGI-like protein mRNA, complete cds.
23-111991991 1.000Capsaspora owczarzaki putative tetraspanin mRNA, partial cds.
24-11112501250 1.000Capsaspora owczarzaki putative fascin mRNA, partial cds.
25-11119951995 1.000Capsaspora owczarzaki MPP mRNA, complete cds.
26-11119561956 1.000Capsaspora owczarzaki DLG mRNA, complete cds.
27-11131953195 1.000Capsaspora owczarzaki integrin beta 1 mRNA, complete cds.
28-11131713171 1.000Capsaspora owczarzaki integrin beta 2 mRNA, complete cds.
29-11135793579 1.000Capsaspora owczarzaki integrin beta 3 mRNA, complete cds.
30-11124392439 1.000Capsaspora owczarzaki integrin beta 4 mRNA, complete cds.
31-11122682268 1.000Capsaspora owczarzaki Brachyury-like protein mRNA, complete cds.
32-11138913891 1.000Capsaspora owczarzaki Double-tbox mRNA, complete cds.
33-11119381938 1.000Capsaspora owczarzaki T-box 3 mRNA, complete cds.
34-11126612661 1.000Capsaspora owczarzaki Runx1 mRNA, complete cds.
35-11118061806 1.000Capsaspora owczarzaki Runx2 mRNA, complete cds.
36-11136723672 1.000Capsaspora owczarzaki NFkappaB mRNA, complete cds.
37-11112931293 1.000Capsaspora owczarzaki isolate HKAS55777 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
38-11125772577 1.000Capsaspora owczarzaki Yorkie-like protein (YAP) mRNA, complete cds.
39-16111231141 0.993Sphaeroforma sp. 1 WLM-2013 isolate CRG3 heat shock protein 70 gene, partial cds.
40-181929976 0.984Sphaeroforma sp. 2 WLM-2013 isolate MC10 heat shock protein 70 gene, partial cds.
41-1215631074 0.762Amoebidium parasiticum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
42-111119119 1.000A.parasiticum 5S rRNA.
43-11172537253 1.000Amoebidium parasiticum mitochondrial chromosome 0555iay58_mtg_cplt, complete sequence.
44-11169026902 1.000Amoebidium parasiticum mitochondrial chromosome 0283riay48_mtg, partial sequence.
45-11150655065 1.000Amoebidium parasiticum mitochondrial chromosome 2153iay75_mtg_cplt, complete sequence.
46-11142844284 1.000Amoebidium parasiticum mitochondrial chromosome 0277iay24_mtg, partial sequence.
47-11133323332 1.000Amoebidium parasiticum mitochondrial chromosome 2902riaz91_mtg_cplt, complete sequence.
48-11132323232 1.000Amoebidium parasiticum mitochondrial chromosome 0356iay27_mtg_cplt, complete sequence.
49-11129472947 1.000Amoebidium parasiticum mitochondrial chromosome 0403iay27_mtg_cplt, complete sequence.
50-11118541854 1.000Amoebidium parasiticum mitochondrial chromosome 0316riay49_mt_cplt, complete sequence.
51-11116781678 1.000Amoebidium parasiticum mitochondrial chromosome 1403riay71_mtg_cplt, complete sequence.
52-11116761676 1.000Amoebidium parasiticum mitochondrial chromosome 0417iay60_mtg_cplt, complete sequence.
53-564773948 0.919Palavascia patagonica isolate ARGD1C15 28S large subunit ribosomal RNA gene, partial sequence.
54-23527971066 0.937Pseudoperkinsus tapetis isolate MB5 heat shock protein 70 gene, partial cds.
55-11128782878 1.000Ministeria vibrans MvPTK-1 mRNA for protein tyrosine kinase, partial cds.
56-11146744674 1.000Ministeria vibrans MvPTK-2 mRNA for protein tyrosine kinase, partial cds.
57-11156115611 1.000Ministeria vibrans MvPTK-3 mRNA for protein tyrosine kinase, partial cds.
58-11161786178 1.000Ministeria vibrans MvPTK-4 mRNA for protein tyrosine kinase, partial cds.
59-11139243924 1.000Ministeria vibrans MvPTK-6 mRNA for protein tyrosine kinase, partial cds.
60-11155035503 1.000Ministeria vibrans MvPTK-7 mRNA for protein tyrosine kinase, complete cds.
61-11152015201 1.000Ministeria vibrans MvPTK-9 mRNA for protein tyrosine kinase, partial cds.
62-11110091009 1.000Enteromyces callianassae isolate CA12C4b 28S large subunit ribosomal RNA gene, partial sequence.
63-12614051164 0.680Creolimax fragrantissima isolate Pe4 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
64-11152855285 1.000Creolimax fragrantissima btub gene for beta-tubuliln, complete cds.
65-11113231323 1.000Creolimax fragrantissima beta-tubulin (tubb) mRNA, partial cds.
66-11111601160 1.000Creolimax fragrantissima 28S ribosomal RNA gene, partial sequence.
67-11110981098 1.000Creolimax fragrantissima heat shock protein 90 (hsp90) mRNA, partial cds.
68-168565579 0.987Caullerya mesnili strain CAUL_tcs-type-C7 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.
69-1115801580 1.000Ichthyosporea sp. ex Tenebrio molitor 28S ribosomal RNA gene, partial sequence.
70-11161446144 1.000Amoeboaphelidium protococcarum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, intergenic spacer 1, and 5S rRNA ribosomal RNA gene, complete sequence; and intergenic spacer 2, partial sequence.
71-111479479 1.000Amoeboaphelidium protococcarum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
72-11153795379 1.000Amoeboaphelidium protococcarum RNA polymerase II largest subunit (RPB1) gene, complete cds.
73-11135253525 1.000Amoeboaphelidium protococcarum RPB2 (RPB2) gene, complete cds.
74-11146674667 1.000Amoeboaphelidium protococcarum isolate FD01 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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