Cluster set at subtree whose root is Mimosoideae (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-25650828241501 0.823Acacia synchronicia isolate S68 external transcribed spacer and small subunit ribosomal RNA gene, partial sequence.
1-40067541155627 0.670Vachellia macracantha voucher JM1346 psbA gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast.
2-9119411416583 0.834Zygia racemosa voucher NH200238 RNA polymerase C (rpoC1) gene, partial cds; chloroplast.
3-208502373371461 0.454Parkia roxburghii ribulose 1,5-bisphosphate carboxylase-oxygenase large subunit (rbcL) gene, choloroplast gene encoding chloroplast protein, partial cds.
8-931013534762 0.963Acacia oswaldii voucher CANB 793495 tRNA-Lys (trnK) gene, intron; and maturase K (matK) gene, partial cds; chloroplast.
9-4831466452501067 0.555Anadenanthera colubrina var. cebil genomic DNA containing 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate San Bernardo.
10-15425520322655 0.883Acacia triquetra voucher CANB 793573 rpl32-trnL intergenic spacer, partial sequence; chloroplast.
11-510740643081977 0.443Acacia usumacintensis tRNA-Leu gene, partial sequence; trnL-trnF intergenic spacer, complete sequence; and tRNA-Phe gene, partial sequence; chloroplast.
60-32403506559 0.938Prosopis strombulifera glyceraldehyde 3-phosphate dehydrogenase (G3pdh) gene, partial cds.
61-33414417421 0.997Xerocladia viridiramis trnS-psbC intergenic spacer, partial sequence; and PsbC (psbC) gene, partial cds; chloroplast.
62-5711199652913380 0.408Acacia schweinfurthii chloroplast trnK gene, intron sequence; and maturase-like sequence.
63-414110425477 0.962Faidherbia albida histone H3-D gene, partial cds.
64-203210224382 0.718Acacia catechu voucher PS0288MT01 Ycf5 (ycf5) gene, partial cds; chloroplast.
65-551101109 0.967Acacia drummondii trnL-trnF intergenic spacer region, chloroplast sequence.
67-494912438445 0.989Pithecellobium dulce photosystem I P700 apoprotein (psaB) gene, partial cds; psaB-rps14 intergenic spacer, complete sequence; and ribosomal protein S14 (rps14) gene, partial cds; chloroplast.
68-69722212852204 0.966Acacia melanoxylon voucher CANB 615580_JM289 AtpB (atpB) gene and atpB-rbcL intergenic spacer, partial sequence; chloroplast.
69-444519566748 0.953Senegalia picachensis voucher DS15981_JM1307 NADH dehydrogenase-like protein (ndhF) gene, partial cds; chloroplast.
70-10913515213685 0.609UNVERIFIED: Acacia dudgeonii isolate b voucher MSDA658 trnL-trnF intergenic spacer, partial sequence; chloroplast.
86-41763102208 0.841Inga maritima plastid accD gene for acetyl-CoA carboxylase beta subunit, isolate EDNA06-04172.
87-42708171487 0.752Zygia racemosa voucher NH200459 RNA polymerase beta subunit gene, partial cds; chloroplast.
88-12263272394 0.918Inga edulis plastid ndhJ gene for NADH dehydrogenase, isolate EDNA06-00038.
89-13213323851 0.770Inga sapindoides isolate EDNA06-00049 ATPase subunit I (atpF) gene, partial cds; and atpF-atpH intergenic spacer and ATPase subunit III (atpH) gene, complete sequence; chloroplast.
90-25403168242 0.877Acacia exuvialis voucher OM260 psbK-psbI intergenic spacer, partial sequence.
99-912510041737 0.818Albizzia julibrissin 18S ribosomal RNA gene, partial sequence.
116-997326513 0.820Leucaena leucocephala voucher J.R. Abbott 24948 (FLAS) trnH gene, partial sequence trnH-psbA intergenic spacer, complete sequence and psbA gene, partial sequence; chloroplast.
123-14142352375 0.958Acacia aroma trnT-trnD intergenic spacer, partial sequence.
124-14142305314 0.994Prosopis flexuosa trnT-trnD intergenic spacer, partial sequence.
466-56953210841487 0.921Inga umbellifera voucher K.G. Dexter & F. Para 495 trnT-trnE intergenic spacer, partial sequence; tRNA-Glu (trnE) gene, trnE-trnY intergenic spacer, tRNA-Tyr (trnY) gene, and trnY-trnD intergenic spacer, complete sequence; and tRNA-Asp (trnD) gene, partial sequence; chloroplast.
467-373926581007 0.841Inga umbellifera ndhF-rpl32 intergenic spacer, partial sequence; chloroplast.
468-30322637903 0.926Inga cocleensis ribosomal protein S16 (rps16) gene, intron; chloroplast.
469-31536795981556 0.907Mimosa misera trnD-trnT intergenic spacer, partial sequence; chloroplast.
512-341891687785 0.952Leucaena pulverulenta 1593 RAPD fragment 23L.
513-2813515111152 0.864Leucaena greggii voucher FHO:Hughes 695 RAPD fragment A9 genomic sequence.
514-431035534642 0.892Leucaena hybrid Hughes 2055 tRNA-Lys (trnK) gene, partial sequence; chloroplast.
515-291451667749 0.978Leucaena confertiflora var. adenotheloidea voucher FHO:Hughes 1730 clone 4 RAPD fragment 28 genomic sequence.
516-281081580669 0.947Leucaena leucocephala subsp. leucocephala voucher FHO:Hughes 1734 clone 3 RAPD fragment A2 genomic sequence.
517-27981552807 0.917Leucaena confertiflora var. adenotheloidea voucher FHO:Hughes 1801 clone 2 RAPD fragment A4A5 genomic sequence.
518-291642592770 0.981Desmanthus fruticosus voucher FHO:Hughes 1532 clone 12 RAPD fragment PA1213 genomic sequence.
581-19191153224 0.897Prosopis argentina internal transcribed spacer 2, partial sequence.
584-23311343596 0.963Prosopis articulata nitrate reductase (NIA) gene, partial cds.
607-17181225393 0.633Prosopis pallida voucher AMWF10 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
608-441473549 0.905Prosopis africana tRNA-Lys (trnK) gene, intron; and maturase K (matK) gene, partial cds; chloroplast.
678-5105722754 0.978Calpocalyx dinklagei isolate SUSY2-7 sucrose synthase (sucS1) gene, exons 10 through 12 and partial cds.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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