Cluster set at subtree whose root is Miracinonyx (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
01111270270 1.000Miracinonyx trumani isolate NTC43093 16S ribosomal RNA gene, partial sequence; mitochondrial.
12111143143 1.000Miracinonyx trumani isolate NTC43093 ATPase 8 (ATP8) gene, partial cds; mitochondrial.
23111300300 1.000Miracinonyx trumani isolate NTC43093 NADH dehydrogenase subunit 5 (ND5) gene, partial cds; mitochondrial.
34111393393 1.000Miracinonyx trumani isolate NTC43093 12S ribosomal RNA gene, partial sequence; mitochondrial.
46111145145 1.000Miracinonyx trumani isolate NTC43093 12S ribosomal RNA gene, partial sequence; nuclear copy of mitochondrial sequence.
55111291291 1.000Miracinonyx trumani isolate NTC43093 cytochrome b (cytb) gene, partial cds; mitochondrial.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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