Cluster set at subtree whose root is Euglenozoa (rel. 194)

Click to see complete taxon coverage matrix or taxon coverage by genus (very large matrices may load slowly!).
Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-1693841113962775 0.792Lepocinclis fusca small subunit ribosomal RNA gene, complete sequence.
1-132260127272148 0.659Euglena cantabrica strain SAG 1224-25 16S small subunit ribosomal RNA gene, partial sequence; chloroplast.
2-1222021216872893 0.609Trachelomonas bernardinensis strain ACOI1103 23S ribosomal RNA gene, partial sequence; chloroplast.
3-177749161078 0.910Lepocinclis ovum strain SAG1244-8 26S large subunit ribosomal RNA gene, partial sequence.
6-8138570927 0.840Crithidia oncopelti paraflagellar rod protein (PFR1) mRNA, partial cds.
12-1317426992907 0.953Menoidium gibbum strain SAG B 233.80 small subunit ribosomal RNA gene, partial sequence.
13-5663931244286 0.805Phacus horridus 28S large subunit ribosomal RNA gene, partial sequence.
21-292911692757 0.946UNVERIFIED: Euglena proxima chloroplast oxygen-evolving enhancer protein 1 precursor-like (psbO) mRNA, partial sequence.
27-44227312818 0.990Colacium sideropus mRNA for putative beta subunit of photoactivated adenylyl cyclase, complete cds, CsPAC2.
33-29321918492572 0.755Petalomonas cantuscygni Hsp90 gene, partial cds.
34-1111610331310 0.923Euglena viridis ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) mRNA, chloroplast gene encoding chloroplast protein, partial cds.
38-99611361707 0.780Euglena mutabilis elongation factor TU (tufA) gene, partial cds; chloroplast gene for chloroplast product.
51-45130603298 0.959Euglena longa mRNA for photoactivated adenylyl cyclase alpha subunit, complete cds.
66-44112091654 0.869Phacus pleuronectes large subunit ribosomal RNA gene, partial sequence.
86-554721783 0.949UNVERIFIED: Eutreptiella pomquetensis heat shock protein 90-like (hsp90) mRNA, partial sequence.
134-44136213848 0.971Euglena sp. MI32 large subunit ribosomal RNA gene, partial sequence.
149-1616112621361 0.950Trachelomonas reticulata large subunit ribosomal RNA gene, partial sequence.
153-44113761605 0.905Trachelomonas strain T502 large subunit ribosomal RNA gene, partial sequence.
175-79112751456 0.920Strombomonas eurystoma strain S600 large subunit ribosomal RNA gene, partial sequence.
179-684115722162 0.767Trypanosoma brucei gambiense strain LiTat 1.3 clone CB4 ISG75 mRNA, complete cds.
184-513111901507 0.923Trypanosoma equiperdum strain STIB 841 serum resistance-associated basic copy (SRAbc) pseudogene, partial sequence.
185-1835810622190 0.625Trypanosoma danilewskyi beta-tubulin mRNA, complete cds.
190-4421497641 0.985Trypanosoma brucei gambiense clone TAR 2.2-37 BES type 2 promoter region.
191-67016934004 0.296Trypanosoma brucei rhodesiense transferrin-binding protein (ESAG 6-d) mRNA, complete cds.
193-432110521491 0.921Trypanosoma equiperdum clone TAR 17 ESAG2 type 2 gene, partial cds.
194-671453495 0.962Trypanosoma brucei rhodesiense isolate AnTat1.12 cathepsin L-like protein gene, partial cds.
195-667112121212 1.000Trypanosoma brucei rhodesiense isolate ob156 haptoglobin-hemoglobin receptor (HpHbR) gene, complete cds.
219-461552552 1.000Trypanosoma congolense glycerol kinase gene, partial cds.
220-4341307262113452 0.437Trypanosoma evansi DNA for 18S rRNA, 5.8S rRNA, complete sequence, 28S rRNA, partial sequence.
222-41061338342 0.999Trypanosoma evansi Tev-21 ESAG6 gene for transferrin receptor, partial cds.
228-145279134503629 0.248Phytomonas serpens isolate 15T glyceraldehyde-3-phosphate dehydrogenase gene, complete cds.
229-51019901147 0.904Trypanosoma evansi aox mRNA for alternative oxidase, complete cds, strain:IL3927.
232-4439901854 0.659Trypanosoma evansi cyclic nucleotide phosphodiesterase (PDE2) gene, partial cds.
237-4221339534 0.786Trypanosoma evansi evansi from horse 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.
238-441507653 0.836Trypanosoma brucei rhodesiense transposon RIME, partial sequence.
240-48117675137 0.443Trypanosoma evansi paraflagellar rod protein 2 mRNA, complete cds.
241-59314244273 0.494Crithidia deanei paraflagellar rod protein (PFR1) mRNA, complete cds.
244-1486211313777 0.344Leishmania aethiopica isolate 917 clone 1 actin gene, complete cds.
252-31197811813758 0.384Trypanosoma rangeli isolate Tre 70 kDa heat shock protein (hsp70) gene, complete cds.
286-12393279829 0.402Trypanosoma rangeli kinetoplastid membrane protein 11 gene cluster, partial sequence.
301-5536342101104 0.597Leishmania sp. MHOM/CN/83/GS2 cytochrome b (cytb) gene, complete sequence; kinetoplast.
302-92451274498 0.921Trypanosoma rangeli cysteine proteinase gene, partial cds.
309-432110202401 0.575Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds.
310-9244217279 0.856Blastocrithidia sp. ex Triatoma guasayana 24S alpha ribosomal RNA gene, partial sequence.
344-2182115941964 0.640Trypanosoma rangeli strain San Agustin clone 3 elongation factor 1-alpha (EF-1alpha) gene, complete cds.
349-67115392330 0.772Trypanosoma congolense mRNA for glycerol kinase, complete cds, strain: IL3900.
360-56112202070 0.663Trypanosoma brucei rhodesiense strain 058CI.A3 glucose-6-phosphate isomerase (Gpi) gene, partial cds.
457-1329811351837 0.717Trypanosoma danilewskyi alpha-tubulin mRNA, complete cds.
478-212147751665 0.533Crithidia oncopelti kinetoplast 12S ribosomal RNA.
480-5541279322 0.936Trypanosoma theileri isolate Tthc18 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.
493-57319052805 0.811Trypanosoma congolense MTP70 mRNA for mitochondrial HSP70, complete cds.
532-46146456991 0.860Trypanosoma congolense IL1180 18S, 5.8S, 28S-LS1, srRNA1, complete sequence, and 28S-LS2 ribosomal RNA, partial sequence.
541-45220412544 0.928T.congolense P69 antigen gene.
688-3155175501784 0.713Procryptobia sorokini HFCC16 28S ribosomal RNA gene, partial sequence.
691-4724741232 0.578Trypanosoma carassii ubiquitin-fusion protein mRNA, complete cds.
717-45136464243 0.935Trypanosoma cyclops beta tubulin gene, partial cds; alpha tubulin gene, complete cds; and beta tubulin gene, partial cds.
735-5544472452 0.360Phytomonas serpens strain 15 calmodulin (calmP) gene, complete cds.
751-777551552 1.000Leptomonas ctenocephali partial vppa gene for putative proton-translocating inorganic pyrophosphatase.
752-69481100 0.887Blastocrithidia triatomiae spliced leader RNA gene, complete sequence.
760-6728671012 0.966Herpetomonas muscarum kinetoplast cytochrome oxidase subunit III (COIII) mRNA, complete cds.
762-441547550 0.997Herpetomonas samuelpessoai kinetoplast 9S rRNA gene.
811-11111201201 1.000Phytomonas sp. Rhabdadenia minicircle conserved region; kinetoplast.
825-308832831288 0.575Leishmania enriettii RNA polymerase II large subunit gene, partial cds.
826-13133502524 0.961Trypanosomatidae sp. G755 isolate G755_PROF1_RPO2R RNA polymerase II large subunit gene, partial cds.
827-493659665 0.996Crithidia deanei mini-exon gene repeat.
830-6628597 0.974Blastocrithidia miridarum spliced leader RNA gene, complete sequence.
831-15191711784 0.956Trypanosomatidae sp. 7VL-B1 trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
833-11126116276 0.552Leptomonas sp. P 5S ribosomal RNA gene and intergenic region, partial sequence.
835-662392403 0.977Leptomonas sp. C4 5S ribosomal RNA gene and intergenic region, partial sequence.
839-99575711 0.839Trypanosomatidae sp. 111YS trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
840-72617101080 0.976Trypanosomatidae sp. 80MV-E trans-spliced leader sequence, complete sequence.
841-14181239781 0.365Trypanosomatidae sp. 136YS trans-spliced leader sequence, complete sequence.
842-21392749832 0.944Trypanosomatidae sp. 113YS-C trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
843-66760808 0.978Trypanosomatidae sp. 115YS trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
849-891695745 0.962Trypanosomatidae sp. Ch2 clone 231JI3_B4 trans-spliced leader sequence SL, complete sequence.
856-44713725 0.991Trypanosomatidae sp. 71CN-D trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
858-44269271 0.995Trypanosomatidae sp. 21EC-B trans-spliced leader sequence, complete sequence.
859-66475478 0.996Trypanosomatidae sp. 4VL-A trans-spliced leader sequence and 5S ribosomal RNA gene, complete sequence.
860-58292385 0.914Trypanosomatidae sp. Ch13 clone 332JI2_B1 trans-spliced leader sequence SL, complete sequence.
862-461198458 0.527Trypanosomatidae sp. 82AL-A trans-spliced leader sequence, complete sequence.
896-452918921 0.999Angomonas deanei clone b coproporphyrinogen III oxidase (CPOX) gene, complete cds.
903-1214112691347 0.979Leishmania guyanensis metacaspase (MCA5) gene, complete cds.
904-111215731115 0.912Leishmania sp. MHOM/CN/90/SC11 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
905-24252859939 0.974Leishmania herreri DNA polymerase alpha gene, partial cds.
906-491263458 0.798Leishmania gymnodactyli isolate LV 247 locus MINA trans-spliced leader sequence SL gene, complete sequence.
914-55336934500 0.889Blastocrithidia culicis type II topoisomerase gene, complete cds.
919-2517927161580 0.740Leishmania sp. strain MHOM/PE/89/BAB1891 6-phosphogluconate dehydrogenase (6pgd) gene, complete cds.
921-14632120196 0.761Leishmania sp. JPC-2012 isolate Canine_10 7SL RNA gene, complete sequence.
962-9241567635 0.914Leishmania gerbilli isolate RHO/CN/62/#1 putative ferrochelatase gene, partial cds.
963-11130110441352 0.944Leishmania enriettii isolate CAV/BR/45 N-acetylglucosamine-1-phosphate transferase gene, partial cds.
967-44140264690 0.929Leishmania enriettii multidrug resistant protein (mdr1) gene, complete cds.
990-62619992498 0.541Leishmania aethiopica isolate 1114-03 cysteine protease (cpb) gene, complete cds.
991-6819842431 0.577Leishmania pifanoi cysteine proteinase gene, complete cds.
992-8161555830 0.751Leishmania guyanensis tryparedoxin peroxidase 2 gene, complete cds.
993-5151276524 0.753Leishmania aethiopica isolate MHOM/ET/72/L100 cysteine proteinase (cpb) gene, partial cds.
994-1010118461875 0.995Leishmania donovani archibaldi strain MHOM:ET/72/GEBRE1 strand switch region, genomic sequence.
995-4521760760 1.000Leishmania gerbilli strain LEM452 locus 2.061 genomic sequence.
996-7581678960 0.784Leishmania gerbilli strain LEM452 locus 03.0980 genomic sequence.
997-9601436903 0.763Leishmania gerbilli strain LEM452 locus 04.0580 genomic sequence.
998-5561636711 0.998Leishmania gerbilli strain LEM452 locus 10.0560 genomic sequence.
999-5561714803 0.998Leishmania gerbilli strain LEM452 locus 12.0010 genomic sequence.
1000-810216421225 0.738Leishmania turanica partial np2 gene for nucleoside hydrolase-like protein, strain MRHO/SU/1983/MARZ-051.
1001-5561810812 1.000Leishmania gerbilli strain LEM452 locus 31.0280 genomic sequence.
1002-4521795795 1.000Leishmania gerbilli strain LEM452 locus 31.1340 genomic sequence.
1003-4521728740 0.992Leishmania gerbilli strain LEM452 locus 31.2130 genomic sequence.
1004-111531221568 0.572Leishmania aethiopica 18S rRNA gene (partial), ITS1 and 5.8S rRNA gene (partial), isolate MHOM/ET/83/85-83.
1005-12161385387 0.997Leishmania guyanensis strain MHOM/BR/75/M4147 7SL RNA gene, partial sequence.
1006-991548558 0.991Leishmania aethiopica genomic DNA containing Rpl23a IGS, isolate LV546.
1007-1420817421141 0.876Leishmania mexicana venezuelensis internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence.
1008-10191516733 0.927Leishmania aethiopica partial 3'UTR sequence, strain MHOM/ET/82/652-82.
1009-11341186218 0.976Leishmania archibaldi DNA repeat region.
1012-7231292447 0.858Leishmania mexicana venezuelensis strain MHOM/VE/74/PM-H3 mini-exon repeat.
1022-66111191119 1.000Leishmania aethiopica mkk gene for putative mitogen-activated protein (MAP) kinase kinase.
1023-7817051077 0.698Leishmania aethiopica partial mpk1 gene for putative mitogen-activated protein kinase.
1024-149219403229 0.582Leishmania panamensis clone Lp63c1 major surface glycoprotein (gp63) pseudogene, complete sequence.
1025-1011519671287 0.860Leishmania aethiopica asat gene for aspartate aminotransferase, strain MHOM/ET/1972/L100.
1026-581256371 0.733Leishmania aethiopica stage-specific S antigen-like protein (A2) gene, A2-type I allele, complete cds.
1027-8201360630 0.698Leishmania panamensis isolate WR 2306 glucosephosphate isomerase gene, partial sequence.
1029-1371115782916 0.582Leishmania guyanensis strain MHOM/BR/1975/M4147 glucose-6-phosphate dehydrogenase (G6PD) mRNA, complete cds.
1030-1150113811971 0.943Leishmania mexicana mexicana pgi gene for glucose-6-phosphate isomerase, strain NHOM/B2/84/BEL46.
1031-7351843954 0.997Leishmania peruviana strain MHOM/PE/92/LEH1384 malate dehydrogenase (mdh) gene, complete cds.
1032-1499111611290 0.969Leishmania sp. strain MHOM/PE/91/LC1418 mannose phosphate isomerase (mpi) gene, complete cds.
1035-771615615 1.000Leishmania lainsoni strain MHOM/BR/81/M6426 RNA polymerase II large subunit gene, partial cds.
1044-8231258327 0.900Leishmania naiffi 18S rRNA gene (partial), ITS1 and 5.8S rRNA gene (partial), strain MDAS/BR/1979/M5533.
1045-441569613 0.978Leishmania panamensis genomic DNA containing Rpl23a IGS, isolate LV145.
1046-4651846945 0.952Leishmania guyanensis strain MHOM/BR/1997/NMT-MAO 292P aquaglyceroporin (AQP1) gene, complete cds.
1048-664214281823 0.817Leishmania donovani donovani tr gene for trypanothione reductase.
1050-7961683683 1.000Leishmania guyanensis strain CLIOC L2937 glucose 6-phosphate dehydrogenase (G6PDH) gene, partial cds.
1051-8971621914 0.993Leishmania guyanensis isolate IOC/L2962 isocitrate dehydrogenase (ICD) gene, partial cds.
1052-8971589589 1.000Leishmania guyanensis isolate IOC/L2956 mannose phosphate isomerase (MPI) gene, partial cds.
1053-525112191237 0.990Leishmania peruviana isolate MHOM/PE/05/WR-2771 calmodulin intergenic spacer, complete sequence.
1054-6111194328 0.714L.lainsoni mini-exon gene for medRNA.
1055-4416671316 0.679Leishmania peruviana subtelomeric tandem repeat sequence.
1061-68714381047 0.826Leishmania guyanensis partial cpb gene for cysteine proteinase b.
1062-145224631620 0.569Leishmania panamensis activated protein kinase C receptor LACK-like mRNA, complete sequence.
1082-4419991070 0.969Leishmania panamensis strain MHOM/PA/1971/LS94 glucose-6-phosphate dehydrogenase (G6PD) mRNA, partial cds.
1096-461536764 0.858Leishmania panamensis ATPase 6 gene; kinetoplast gene for kinetoplast product.
1105-10122394427 0.981Leishmania equatorensis DNA, trans-spliced leader RNA sequence, strain:Lsp-1.
1114-5619511440 0.717Leishmania pifanoi single strand-specific nuclease (P-4) mRNA, complete cds.
1155-44114401443 0.999Leishmania donovani donovani isolate MHOMISD/OO/lS-2D lanosterol 14-alpha demethylase (CYP51) gene, complete cds.
1161-44113691688 0.901Leishmania donovani donovani mRNA for cdc2-related kinase 3 (crk3 gene).
1165-657112031308 0.967Leishmania donovani archibaldi strain MHOM/ET/1972/GEBRE1 mitochondrial isocitrate dehydrogenase (icd) gene, complete cds; nuclear gene for mitochondrial product.
1166-546114761644 0.987Leishmania gerbilli strain MRHO/CN/1960/Gerbilli cytosolic NADP-malic enzyme (me) gene, partial cds.
1167-655116711707 0.994Leishmania donovani archibaldi strain MHOM/SD/1997/LEM3463 fumarate hydratase (fh) gene, complete cds.
1169-41313826899 0.133Leishmania sp. DNA, mini-exon derived from RNA, isolate:MHOM/CN/96/KS-6.
1175-4731392816 0.906Leishmania sp. kinetoplast minicircle DNA, isolate sandfly N45.
1185-441519543 0.971Leishmania turanica NADH dehydrogenase subunit 4 (ND4) and NADH dehydrogenase subunit 3 (ND3/G5) and ribosomal protein S12 (rps12)-like genes, partial sequence; kinetoplast maxicircle.
1186-9131936936 1.000Leishmania turanica isolate RHO/CN/92/Qi Dai zeta-crystallin/NADPH-oxidoreductase-like protein gene, partial cds.
1187-61518191496 0.638Leishmania gerbilli strain KXG2 prostaglandin f2-alpha synthase gene, partial cds.
1208-552506650 0.860Leishmania sp. IMT208 hypoxanthine-guanine phosphoribosyltransferase (HGPRT) gene, partial cds.
1210-4418641535 0.679Leishmania sp. BK-2007 pteridine reductase 1 (PTR1) gene, complete cds.
1213-8141301379 0.924Leishmania sp. siamensis clone LE-San1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence.
1214-4517561396 0.657Leishmania sp. siamensis isolate PCM2 triosephosphate isomerase (tim) mRNA, complete cds.
1215-49185139 0.834Leishmania sp. IRN580 internal transcribed spacer 2, partial sequence; and microsatellite ITS2 sequence.
1217-881311313 0.999Leishmania sp. MHOM/CN/84/SD1 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence.
1218-23334322687 0.814Leishmania sp. MHOM/CN/84/SD1 cytochrome oxidase subunit II (COII) gene, partial sequence; kinetoplast.
1251-453326569 0.715Wallaceina sp. Wsd maxicircle NADH dehydrogenase subunit 8 (ND8) mRNA, complete cds; mitochondrial.
1269-4102874877 0.997Wallaceina inconstans isolate 1 trans-spliced leader sequence SL (trans-spliced leader sequence SL) gene, complete sequence.
1270-4423946 0.951Leptomonas sp. Cfm spliced leader RNA gene, partial sequence.
1363-44676677 1.000Perkinsiella-like sp. PLO/ST4N trans-spliced leader sequence SL gene, complete sequence.
1366-559615383053 0.557Ichthyobodo necator 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
1377-99459463 0.992Perkinsiella-like sp. PLO/NETH2T3/I trans-spliced leader sequence SL gene, complete sequence.
1412-1013219752148 0.944Diplonema sp. ATCC 50232 18S ribosomal RNA gene, partial sequence.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


Back to taxonomic hierarchy view