Cluster set at subtree whose root is Cryptophyta (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-137319195392054 0.840Hanusia phi nucleomorph 18S ribosomal RNA gene, complete sequence.
1-3035127151490 0.701P.salina plastidal 16S ribosomal RNA.
2-213495841299 0.928Cryptomonas gyropyrenoidosa plastid partial rbcL gene for large subunit of RuBisCO, strain CCAC 0108.
3-111430430 1.000Geminigera cryophila chloroplast cbbX mRNA, partial cds; nuclear gene for chloroplast product.
4-111297297 1.000Geminigera cryophila chloroplast light-harvesting complex protein 10 mRNA, partial cds; nuclear gene for chloroplast product.
5-16278487957 0.779Chroomonas sp. SAG 980-1 photosystem II reaction center protein D1 (psbA) gene, partial cds; chloroplast gene for chloroplast product.
6-442723807 0.929Geminigera cryophila strain CCMP2564 28S ribosomal RNA gene, partial sequence; nucleomorph.
7-101198421039 0.872Proteomonas sulcata tufA gene for translation elongation factor Tu, partial cds.
8-686932989 0.975Hemiselmis rufescens strain CCMP440 16S small subunit ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S large subunit ribosomal RNA gene, partial sequence; chloroplast.
9-441369369 1.000Teleaulax acuta nucleomorph gene for 18S rRNA, partial sequence.
10-111369369 1.000Teleaulax amphioxeia isolate SCCAP K0434 16S-23S ribosomal RNA intergenic spacer, partial sequence; tRNA-Ala (trnA) gene, complete sequence; and 23S ribosomal RNA gene, partial sequence; plastid.
11-1101392392 1.000Teleaulax amphioxeia clone RW07(7) ribulose-1,5-bisphosphate carboxylase oxygenase large subunit (rbcL) gene, partial cds; chloroplast.
12-111687687 1.000Teleaulax amphioxeia culture-collection SCCAP:K-0434 5.8 S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
13-11628628 1.000Cryptophyta gen. sp. Concarneau_14 24S large subunit ribosomal RNA gene, partial sequence.
14-152996141167 0.722Goniomonas truncata clone gtactin3 actin gene, partial cds.
15-2319871171 0.910Cryptophyceae sp. SL64/78sp clone D8 alpha tubulin (atub) mRNA, partial cds.
16-71166551258 0.803Goniomonas truncata clone gttub6 beta tubulin mRNA, partial cds.
17-6112479581761 0.710Cryptomonas sp. M2195 5.8S rRNA gene (partial), 28S rRNA gene (partial) and ITS2, strain M2195.
18-11156475647 1.000Hanusia phi strain CCMP325 18S ribosomal RNA gene, partial sequence; hypothetical proteins and ubiquitin conjugating enzyme (ubc4) genes, complete cds; and molecular chaperone (hsp90) gene, partial cds; nucleomorph.
19-111751751 1.000Hanusia phi preprotein translocase subunit SecY (secY) gene, partial cds; ribosomal protein L36 (rpl36) gene, complete cds; and 30S ribosomal protein S13 (rps13) gene, partial cds; chloroplast.
20-11117481748 1.000Hanusia phi cytosolic glucose-6-phosphate isomerase (GPI) mRNA, complete cds.
21-11114581458 1.000Hanusia phi chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor (DXR) mRNA, complete cds; nuclear gene for chloroplast product.
22-11110131013 1.000Hanusia phi putative mitochondrial ADP/ATP translocase mRNA, partial cds; nuclear gene for mitochondrial product.
23-111836836 1.000Hanusia phi strain CCMP325 28S ribosomal RNA gene, partial sequence; nucleomorph.
24-111784784 1.000Cryptomonas phi phage T3/T7-like RNA polymerase gene, partial cds.
25-22210281093 0.970Pyrenomonas salina glycolytic glyceraldehyde-3-phosphate dehydrogenase (GapC) mRNA, complete cds.
26-4449041239 0.864Pyrenomonas salina glyceraldehyde-3-phosphate dehydrogenase precursor (GapC1) mRNA, nuclear gene encoding chloroplast protein, complete cds.
27-111945945 1.000P.salina plastid rpoA gene for DNA-directed RNA polymerase alpha subunit.
28-22219472286 0.926Rhodomonas salina 70 kDa heat shock protein (hsp70) mRNA, partial cds; nucleomorph.
29-11112361236 1.000P.salina plastid gene secY.
30-22214461485 0.987P.salina sec61 mRNA.
31-111990990 1.000P.salina histone H4 gene.
32-11144644464 1.000P.salina plastid CPN60 gene.
33-55512411395 0.968Pyrenomonas helgolandii photosystem I P700 chlorophyll A apoprotein A1 (psaA) gene, partial cds; chloroplast gene for chloroplast product.
34-33312661266 1.000Chroomonas sp. SAG 980-1 photosystem I P700 chlorophyll a apoprotein A2 (psaB) gene, partial cds; chloroplast.
35-4447591057 0.896Proteomonas sulcata chromoplast psbC gene for photosystem II 44 kDa reaction center protein, partial cds.
36-444798892 0.962Proteomonas sulcata chromoplast psbD gene for photosystem II D2 protein, partial cds.
37-111308308 1.000Rhodomonas salina tmRNA proteolysis tag (ssrA) gene, partial cds; plastid gene for plastid product.
38-111624624 1.000Rhodomonas salina partial vppII gene for proton-translocating inorganic pyrophosphatase.
39-45316532056 0.890Goniomonas truncata clone gthsp9041 Hsp90 gene, partial cds.
40-11112331233 1.000Rhodomonas salina elongation factor 1 alpha gene, partial cds.
41-111742742 1.000Rhodomonas salina strain CCMP1319 heat shock protein 90 (hsp90) gene, partial cds; nucleomorph.
42-22211161444 0.886Rhodomonas salina CbbX protein (cbbX) mRNA, partial cds; nucleomorph.
43-111975975 1.000Rhodomonas salina ATP-dependent Clp protease proteolytic subunit ClpP (clpP) mRNA, partial cds; nucleomorph.
44-11113201320 1.000Rhodomonas salina chaperonin Cpn60 (cpn60) mRNA, partial cds; nucleomorph.
45-111774774 1.000Rhodomonas salina cell division protein FtsZ mRNA, partial cds; nucleomorph.
46-111636636 1.000Rhodomonas salina high light inducible protein (hlip) mRNA, partial cds; nucleomorph.
47-111655655 1.000Rhodomonas salina rubredoxin mRNA, partial cds; nucleomorph.
48-111654654 1.000Rhodomonas salina 40S ribosomal protein 2 (rps2) mRNA, partial cds; nucleomorph.
49-11126002600 1.000Rhodomonas salina 82 kDa heat shock protein (hsp82) mRNA, partial cds; nucleomorph.
50-111328328 1.000Rhodomonas salina 60S ribosomal protein 1 (rpl17) mRNA, partial cds; nucleomorph.
51-111311311 1.000Rhodomonas salina 60S ribosomal protein 23 (rpl28) mRNA, partial cds; nucleomorph.
52-111611611 1.000Rhodomonas salina 60S ribosomal protein 11 (rpl11) mRNA, partial cds; nucleomorph.
53-111558558 1.000Rhodomonas salina SNF1 related protein kinase (snf1) mRNA, partial cds; nucleomorph.
54-111734734 1.000Rhodomonas salina serine tRNA ligase (sys1) mRNA, partial cds; nucleomorph.
55-111724724 1.000Rhodomonas salina tubulin alpha 1 chain (tubA) mRNA, partial cds; nucleomorph.
56-111298298 1.000Rhodomonas salina chloroplast cytochrome b6 (cyb6) mRNA, partial cds; nuclear gene for chloroplast product.
57-111507507 1.000Rhodomonas salina chloroplast glucose-6-phosphate translocator mRNA, partial cds; nuclear gene for chloroplast product.
58-111401401 1.000Rhodomonas salina chloroplast 50S ribosomal protein 17 (rpl17) mRNA, partial cds; nuclear gene for chloroplast product.
59-111237237 1.000Rhodomonas salina chloroplast 50S ribosomal protein 28 (rpl28) mRNA, partial cds; nuclear gene for chloroplast product.
60-111590590 1.000Rhodomonas salina chloroplast triose phosphate isomerase mRNA, partial cds; nuclear gene for chloroplast product.
61-111697697 1.000Rhodomonas salina chloroplast phosphoribulokinase (prkB) mRNA, partial cds; nuclear gene for chloroplast product.
62-141336338 0.996Rhodomonas salina strain CCMP 1319 clone 3 Ty3-gypsy retrotransposon nonfunctional reverse transcriptase domain gene, partial sequence.
63-171336339 0.993Rhodomonas salina strain CCMP 1319 clone 2 Ty3-gypsy retrotransposon nonfunctional reverse transcriptase domain gene, partial sequence.
64-111335335 1.000Rhodomonas salina strain CCMP 1319 clone 12 Ty3-gypsy retrotransposon nonfunctional reverse transcriptase domain gene, partial sequence.
65-35313051468 0.959Rhodomonas salina strain CCMP 1319 translation elongation factor-like protein (EFL) mRNA, EFL-1 allele, complete cds.
66-71568481399 0.809Goniomonas truncata alpha-tubulin (atub) gene, partial cds.
67-111738738 1.000Rhodomonas salina strain CCAP 978/24 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
68-111390390 1.000Rhodomonas salina strain CCMP 1419 assimilatory nitrate reductase (NR) gene, partial cds.
69-12117401746 0.998Rhodomonas salina enolase 1 (eno) gene, partial cds.
70-11110721072 1.000Proteomonas sulcata chromoplast atpA gene for ATP synthase CF1 alpha chain, partial cds.
71-111988988 1.000Proteomonas sulcata chromoplast psbB gene for photosystem II P680 chlorophyll A apoprotein, partial cds.
72-111592592 1.000Proteomonas sulcata chromoplast petB gene for cytochrome b6, partial cds.
73-111392392 1.000Proteomonas sulcata strain CCMP704 18S ribosomal RNA gene, partial sequence; and hypothetical protein gene, complete cds; nucleomorph.
74-11127502750 1.000Proteomonas sulcata strain CCMP704 ubiquitin conjugating enzyme (ubc4) gene, ubc4-19 allele and hypothetical protein (orf64) gene, complete cds; and heat shock protein 90 (hsp90) gene, partial cds; nucleomorph.
75-11128342834 1.000Rhodomonas sp. CS24 cpeA gene encoding phycoerythrin alpha-subunit and cpeA gene encoding phycoerythrin alpha-subunit 2.
76-11124952495 1.000Rhodomonas sp. CS24 cpeA gene for phycoerythrin alpha-subunit 1 and cpeA gene for phycoerythrin alpha-subunit 2.
77-11133273327 1.000Rhodomonas sp. CS24 cpeA gene for phycoerythrin alpha-subunit 1 and cpeA gene for phycoerythrin alpha-subunit 2.
78-11149794979 1.000Rhodomonas sp. CS24 lhcc5 gene for light-harvesting complex protein Lhcc5 precursor, exons 1-3.
79-11116021602 1.000Rhodomonas sp. CS24 lhcc6 gene for light-harvesting complex protein Lhcc6 precursor, exons 1-3.
80-4547921061 0.929Pyrenomonas helgolandii psbO mRNA for oxygen-evolving enhancer protein, partial cds, strain: SAG 28.8.
81-11112931293 1.000Pyrenomonas helgolandii strain SAG 28.87 glutamine synthetase II mRNA, partial cds.
82-111287287 1.000Pyrenomonas helgolandii strain SAG 28.87 trichocyst-like protein 3-1 (Tri3-1) mRNA, complete cds.
83-111272272 1.000Pyrenomonas helgolandii strain SAG 28.87 trichocyst-like protein 3-2 (Tri3-2) mRNA, complete cds.
84-111431431 1.000Pyrenomonas helgolandii trichocyst-like protein 1 (Tri1) mRNA, complete cds.
85-111323323 1.000Pyrenomonas helgolandii trichocyst-like protein 2 (Tri2) mRNA, complete cds.
86-66429494168 0.793Goniomonas avonlea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
87-33310651323 0.870Chroomonas mesostigmatica strain CCMP 269 luminal binding protein (BIP) gene, partial cds.
88-111921921 1.000Storeatula sp. CCMP1868 strain CCMP 1868 70 kDa heat shock protein (hsp70) gene, partial cds.
89-111633633 1.000Rhodomonas baltica partial vppII gene for proton-translocating inorganic pyrophosphatase.
90-222576576 1.000Cryptomonas sp. Crypto B partial vppI gene for proton-translocating inorganic pyrophosphatase.
91-11119721972 1.000Rhodomonas baltica DNA polymerase III gamma and tau subunits (dnaX) gene, complete cds; tRNA-Arg (trnR) and tRNA-Gln (trnQ) genes, complete sequence; and photosystem II reaction center protein W (psbW) gene, partial cds; chloroplast.
92-11115901590 1.000Rhodomonas baltica strain RCC350 GroEL (GroEL) gene, complete cds; chloroplast.
93-111415415 1.000Rhodomonas sp. CCMP768 plastid C1 class II fructose bisphosphate aldolase (fbaC1) mRNA, partial cds; nuclear gene for plastid product.
94-111736736 1.000Rhodomonas sp. CCMP768 proliferating cell nuclear antigen (PCNA) mRNA, partial cds.
95-171256256 1.000Rhodomonas ovalis R-4 mRNA for iron transporter like.
96-141251253 0.994Rhodomonas ovalis R-11 mRNA for iron transporter like.
97-141260260 1.000Rhodomonas ovalis R-14 mRNA for iron transporter like.
98-131248248 1.000Rhodomonas ovalis R-18 mRNA for iron transporter like.
99-11150315031 1.000Rhodomonas sp. CCMP2045 GroEL (groEL) gene, partial cds; and RT/maturase (IEP) gene, complete cds; plastid.
100-11116701670 1.000Rhodomonas sp. CCMP1178 DNA polymerase III gamma and tau subunits (dnaX) gene, complete cds; and tRNA-Arg (trnR) and tRNA-Gln (trnQ) genes, complete sequence; chloroplast.
101-11133923392 1.000Rhodomonas sp. CCMP1178 GroEL (groEL) gene, partial cds; and RT/maturase (IEP) gene, complete cds; plastid.
102-111669669 1.000Rhodomonas sp. CCMP1178 methionine adenosyltransferase gene, partial cds.
103-111921921 1.000Rhodomonas sp. CCMP1178 pre-mRNA processing factor 8 (prp8) gene, partial cds; nucleomorph.
104-11113421342 1.000Rhodomonas sp. CCMP1178 regulator of epidermal growth factor receptor (ebi) gene, partial cds; nucleomorph.
105-111777777 1.000Rhodomonas sp. CCMP1178 26S proteasome subunit alpha 7 (prsA7) gene, partial cds; nucleomorph.
106-11134513451 1.000Rhodomonas sp. CCMP1170 type 1 chaperonin (GroEL) gene, partial cds; DNA polymerase III gamma and tau subunits (dnaX) gene, complete cds; tRNA-Arg (trnR) and tRNA-Gln (trnQ) genes, complete sequence; and photosystem II reaction center protein W (psb28) gene, partial cds; chloroplast.
107-111636636 1.000Cryptomonas paramecium isolate CHILOPAR large subunit ribosomal RNA gene, partial sequence.
108-191200215 0.981Cryptomonas paramecium strain CCAP977/2A clone 9 Ty3-gypsy retrotransposon nonfunctional reverse transcriptase domain gene, partial sequence.
109-151214219 0.985Cryptomonas paramecium strain CCAP977/2A clone 10 Ty3-gypsy retrotransposon reverse transcriptase domain gene, partial cds.
110-111244244 1.000Cryptomonas paramecium strain CCAP977/2A clone 13 Ty3-gypsy retrotransposon reverse transcriptase domain gene, partial cds.
111-111931931 1.000Cryptomonas paramecium methionine adenosyltransferase gene, partial cds.
112-221376376 1.000Cryptomonas sp. SAG 979-8 23S large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast.
113-111124124 1.000Chilomonas paramecium 5S rRNA.
114-3325701593 0.674Cryptomonas ovata mitochondrial COXI gene for cytochrome c oxidase subunit I, partial cds.
115-111670670 1.000Cryptomonas ovata 18S ribosomal RNA gene, partial sequence.
116-773912972 0.980Cryptomonas marssonii voucher HBI 3545x 23S ribosomal RNA gene, partial sequence; chloroplast.
117-11112201220 1.000Chroomonas mesostigmatica strain CCMP1168 heat shock protein 90 gene, partial cds; nucleomorph.
118-111867867 1.000Chroomonas mesostigmatica preprotein translocase subunit SecY (secY) gene, partial cds; ribosomal protein L36 (rpl36) gene, complete cds; and 30S ribosomal protein S13 (rps13) gene, partial cds; chloroplast.
119-332316316 1.000Chroomonas pauciplastida light-independent protochlorophyllide oxidoreductase subunit L (chlL) gene, partial cds; plastid.
120-22111031126 0.990Chroomonas pauciplastida light-independent protochlorophyllide oxidoreductase subunit N (chlN) gene, partial cds; plastid.
121-111989989 1.000Chroomonas mesostigmatica strain CCMP 269 70 kDa heat shock protein (hsp70) gene, partial cds.
122-111703703 1.000Cryptomonas tetrapyrenoidosa preprotein translocase subunit SecY (secY) gene, partial cds; ribosomal protein L36 (rpl36) gene, complete cds; and 30S ribosomal protein S13 (rps13) gene, partial cds; chloroplast.
123-11144594459 1.000Cryptomonas curvata plastid partial ribosomal RNA operon, strain CCAC 0006.
124-11124032403 1.000Chroomonas pauciplastida light-independent protochlorophyllide oxidoreductase subunit B (chlB) gene, partial cds; plastid.
125-111509509 1.000Chroomonas salina 18S ribosomal RNA gene, partial sequence.
126-11112071207 1.000Goniomonas truncata clone gthsp70-11 70 kDa heat shock protein gene, partial cds.
127-121388388 1.000Goniomonas truncata clone gthsp70-4 70 kDa heat shock protein mRNA, partial cds.
128-121720720 1.000Goniomonas truncata clone gteef2-10 70 kDa heat shock protein mRNA, partial cds.
129-12115751575 1.000Goniomonas truncata clone gteef2-8 eukaryotic translation elongation factor 2 mRNA, partial cds.
130-11115221522 1.000Goniomonas truncata beta-tubulin (btub1) gene, partial cds.
131-111627627 1.000Cryptomonas sp. Crypto B partial vppII gene for proton-translocating inorganic pyrophosphatase.
132-111576576 1.000Cryptomonas sp. Crypto B partial vppIa gene for proton-translocating inorganic pyrophosphatase.
133-11113111311 1.000Goniomonas amphinema EFL mRNA for translation elongation factor-like protein, partial cds.
134-111827827 1.000Cryptomonas sp. S2 opsin mRNA, complete cds.
135-11112961296 1.000Cryptomonas phaseolus strain SAG 2013 glutamine synthetase II mRNA, partial cds.
136-111223223 1.000Plagioselmis nannoplanctica partial mRNA for actin, contig 16255.
137-111420420 1.000Plagioselmis nannoplanctica partial mRNA for ADP-ribosylation factor 3, contig 10571.
138-111336336 1.000Plagioselmis nannoplanctica partial mRNA for V-type proton ATPase catalytic subunit A, contig 16452.
139-111596596 1.000Plagioselmis nannoplanctica partial mRNA for tubulin beta, contig 17181.
140-111364364 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein SA, contig 06934.
141-111485485 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S16, contig 06369.
142-111228228 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S15, contig 06815.
143-111241241 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S14, contig 05499.
144-111241241 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S13, contig 01293.
145-111330330 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S11, contig 04104.
146-111233233 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L27a, contig 02445.
147-111216216 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S3a, contig 16675.
148-111229229 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S3, contig 12050.
149-111443443 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S4, contig 17769.
150-111222222 1.000Plagioselmis nannoplanctica partial mRNA for 40S ribosomal protein S5, contig 16586.
151-111479479 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L18a, contig 04069.
152-111322322 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L19, contig 17455.
153-111228228 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L13a, contig 15461.
154-111231231 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L12, contig 10440.
155-111435435 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L3, contig 12288.
156-111280280 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L8, contig 01385.
157-111224224 1.000Plagioselmis nannoplanctica partial mRNA for eukaryotic peptide chain release factor subunit 1, contig 03112.
158-111210210 1.000Plagioselmis nannoplanctica partial mRNA for GTP-binding nuclear protein Ran, contig 11840.
159-111241241 1.000Plagioselmis nannoplanctica partial mRNA for Ras-related C3 botulinum toxin substrate 2, contig 04225.
160-111238238 1.000Plagioselmis nannoplanctica partial mRNA for pyruvate kinase isozymes R/L, contig 04572.
161-111306306 1.000Plagioselmis nannoplanctica partial mRNA for proteasome subunit beta type-6, contig 04317.
162-111226226 1.000Plagioselmis nannoplanctica partial mRNA for proteasome subunit beta type-7, contig 00724.
163-111222222 1.000Plagioselmis nannoplanctica partial mRNA for proteasome subunit alpha type-1, contig 14253.
164-111233233 1.000Plagioselmis nannoplanctica partial mRNA for proteasome subunit alpha type-4, contig 11354.
165-111230230 1.000Plagioselmis nannoplanctica partial mRNA for transitional endoplasmic reticulum ATPase, contig 11373.
166-111206206 1.000Plagioselmis nannoplanctica partial mRNA for 60S ribosomal protein L10, contig 07386.
167-111550550 1.000Plagioselmis nannoplanctica partial mRNA for cathepsin L1, contig 10881.
168-111688688 1.000Hemiselmis virescens malonyl-CoA:ACP transacylase (fabD) gene, partial cds; nuclear gene for plastid product.
169-11135353535 1.000Hemiselmis andersenii light-independent protochlorophyllide oxidoreductase subunit B (chlB) gene, partial cds; and reverse transcriptase/maturase gene, complete cds; plastid.
170-111873873 1.000Hemiselmis andersenii light-independent protochlorophyllide oxidoreductase subunit L (chlL) gene, partial cds; plastid.
171-22111531203 0.979Hemiselmis andersenii light-independent protochlorophyllide oxidoreductase subunit N (chlN) gene, partial cds; plastid.
172-111792792 1.000Hemiselmis tepida strain CCMP442 28S ribosomal RNA gene, partial sequence; nucleomorph.
173-222463613 0.878Hemiselmis sp. G3-37-2 partial 18S rRNA gene, clone G3-37-2.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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