Cluster set at subtree whose root is Choanoflagellida (rel. 194)

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Cluster ID	Parent cluster	TaxIDs	GIs	Genera	L_min	L_max	MAD¹	Defline of longest sequence
1	-	40	69	16	503	2065	0.735	Salpingoeca amphoridium 18S small subunit ribosomal RNA gene, partial sequence.
56	-	16	17	10	1612	4159	0.728	Salpingoeca amphoridium 28S ribosomal RNA gene, partial sequence.
58	-	16	21	9	754	1487	0.693	Monosiga brevicollis alpha-tubulin mRNA, complete cds.
95	-	8	11	4	675	1526	0.663	Monosiga brevicollis beta-tubulin mRNA, complete cds.
96	-	5	5	4	847	1206	0.785	Monosiga brevicollis actin mRNA, complete cds.
102	-	4	4	2	1434	2264	0.748	Monosiga brevicollis 90-kDa heat-shock protein (hsp90) mRNA, partial cds.

¹ Maximum Alignment Density
² Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.

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