Cluster set at subtree whose root is basal Magnoliophyta (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-108221193571484 0.731Victoria amazonica ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, complete cds; chloroplast.
1-93218184372981 0.475Nymphaea macrosperma tRNA-Lys (trnK) gene, partial sequence; maturase K (matK) gene, complete cds; and trnK-psbA intergenic spacer, partial sequence; chloroplast.
2-4143137541302 0.672Sarcandra glabra subsp. brachystachys chloroplast partial rps3 gene for small ribosomal protein subunit 3 and partial rpl16 gene for large ribosomal protein subunit 16, isolate N119.
3-303115849971 0.917Chloranthus officinalis petB-petD intergenic spacer, partial sequence; and PetD (petD) gene, intron and partial cds; chloroplast.
4-342610814 0.906Illicium henryi PISTILLATA-like protein PI-2 mRNA, partial cds.
5-552585854 0.816Illicium henryi APETALA3-like protein AP3-1 mRNA, partial cds.
6-371603949 0.790Illicium henryi APETALA3-like protein AP3-3A mRNA, partial cds.
7-111652652 1.000Illicium floridanum AG (AG) mRNA, partial cds.
8-18191420293329 0.912Chloranthus japonicus 26S ribosomal RNA gene, complete sequence.
9-16161615652280 0.830Chloranthus multistachys small subunit ribosomal RNA gene, partial sequence; mitochondrial.
10-13131328913968 0.845Austrobaileya scandens large subunit ribosomal RNA gene, partial sequence; mitochondrial.
11-16171510281338 0.840Austrobaileya scandens NADH dehydrogenase subunit 5 (nad5) gene, partial cds; mitochondrial.
12-15151422654170 0.613Nuphar advena RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast.
13-88825962639 0.993Nymphaea sp. Qiu 91029 large subunit ribosomal RNA gene, partial sequence; chloroplast.
14-99813161475 0.981Austrobaileya scandens small subunit ribosomal RNA gene, partial sequence; chloroplast.
15-24256208462 0.689Hedyosmum mexicanum plastid trnL-trnF intergenic spacer and partial tRNA-Phe gene, specimen voucher Salazar s.n. (MEXU).
16-156256172901913 0.620Nymphaea violacea isolate NY448 trnT-trnL intergenic spacer, partial sequence; tRNA-Leu gene, complete sequence; and trnL-trnF intergenic spacer, partial sequence; chloroplast.
17-21214551598 0.984Illicium hottense trnG-trnS intergenic spacer, partial sequence; chloroplast.
18-451053429924 0.711Illicium tsangii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
19-14141414191500 0.966Trimenia moorei ribosomal protein S3 (rps3) gene, partial cds; mitochondrial.
20-888162201 0.941Euryale ferox 28S ribosomal RNA (28S rRNA), ca. bp 738 to 938 in mature rRNA.
21-888158193 0.931Euryale ferox 28S ribosomal RNA (28S rRNA), ca. bp 1611 to 1803 in mature rRNA.
22-4448896 0.974Euryale ferox 28S ribosomal RNA (28S rRNA), ca. bp 2056 to 2151 in mature rRNA.
23-88883133 0.850Brasenia schreberi 18S ribosomal RNA (18S rRNA), ca. bp 91 to 223 in mature rRNA.
24-7775556 0.997Cabomba caroliniana 18S ribosomal RNA (18S rRNA), ca. bp 234 to 289 in mature rRNA.
25-888186249 0.927Barclaya longifolia 18S ribosomal RNA (18S rRNA), ca. bp 294 to 543 in mature rRNA.
26-888143215 0.897Barclaya longifolia 18S ribosomal RNA (18S rRNA), ca. bp 911 to 1126 in mature rRNA.
27-888132211 0.836Chloranthus spicatus 18S ribosomal RNA (18S rRNA), ca. bp 1203 to 1414 in mature rRNA.
28-888106168 0.832Barclaya longifolia 18S ribosomal RNA (18S rRNA), ca. bp 1522 to 1688 in mature rRNA.
29-7773539 0.978Euryale ferox 18S ribosomal RNA (18S rRNA), ca. bp 1716 to 1757 in mature rRNA.
30-2530168791270 0.947Sarcandra chloranthoides ATPase alpha subunit (atp1) gene, partial cds; mitochondrial gene for mitochondrial product.
31-35361816431837 0.967Austrobaileya scandens maturase (matR) gene, partial cds; mitochondrial gene for mitochondrial product.
32-33330393039 1.000Nymphaea odorata RNA polymerase II largest subunit (RPB1) mRNA, partial cds.
33-11116381638 1.000Illicium parviflorum RNA polymerase III large subunit mRNA, partial cds.
34-11116201620 1.000Illicium parviflorum RNA polymerase I large subunit mRNA, partial cds.
35-11127562756 1.000Illicium parviflorum mRNA for putative auxin response factor 1 (arf1 gene).
36-11128932893 1.000Illicium parviflorum mRNA for putative auxin response factor 3 (arf3 gene).
37-11130213021 1.000Illicium parviflorum mRNA for putative auxin response factor 8 (arf8 gene).
38-24401615421809 0.959Hedyosmum arborescens 18S ribosomal RNA gene, complete sequence.
39-3266165001497 0.754Sarcandra grandiflora chloroplast atpB gene.
40-11111020354329 0.845Trithuria filamentosa ribosomal protein S12 (rps12) gene, partial cds; and ribosomal protein S7 (rps7) and NADH dehydrogenase subunit B (ndhB) genes, complete cds; chloroplast.
41-11111012201283 0.985Trimenia moorei ribosomal protein L2 (rpl2) gene, partial cds; chloroplast gene for chloroplast product.
42-1416139982086 0.677Trithuria submersa NADH dehydrogenase subunit F (ndhF) gene, partial cds; chloroplast.
43-12131110592222 0.893Trimenia moorei photosystem II D2 protein (psbD) and photosystem II CP43 protein (psbC) genes, partial cds; chloroplast genes for chloroplast products.
44-111110627720 0.969Schisandra chinensis cytochrome b-559 alpha subunit (psbE) gene, partial cds; cytochrome b-559 beta subunit (psbF) and PsbF (psbL) genes, complete cds; and PsbJ (psbJ) gene, partial cds; chloroplast genes for chloroplast products.
45-1719118802398 0.758Austrobaileya scandens photosystem II CP47 protein (psbB) gene, partial cds; PsbT (psbT) and PsbN (psbN) genes, complete cds; and PsbH (psbH) gene, partial cds; chloroplast genes for chloroplast products.
46-333180180 1.000Nymphaea odorata arginine decarboxylase gene, partial cds.
47-333234243 0.975Illicium parviflorum translation initiation factor IF1 (infA) gene, complete cds; chloroplast gene for chloroplast product.
48-111270270 1.000Schisandra sphenanthera clone SS4 microsatellite sequence.
49-111318318 1.000Schisandra sphenanthera clone SS9 microsatellite sequence.
50-111640640 1.000Schisandra sphenanthera clone SS16 microsatellite sequence.
51-111411411 1.000Schisandra sphenanthera clone SS18 microsatellite sequence.
52-111362362 1.000Schisandra sphenanthera clone SS21 microsatellite sequence.
53-111319319 1.000Schisandra sphenanthera clone SS24 microsatellite sequence.
54-111536536 1.000Schisandra sphenanthera clone SS38 microsatellite sequence.
55-111378378 1.000Schisandra sphenanthera clone SS42 microsatellite sequence.
56-111453453 1.000Schisandra sphenanthera clone SS49 microsatellite sequence.
57-17493311484 0.905Schisandra bicolor voucher NMNH 06-8343 psbA-trnH intergenic spacer, partial sequence; chloroplast.
58-101010329412 0.899Nymphaea sp. Qiu91029 mitochondrial protein (rps2) gene, partial cds; mitochondrial gene for mitochondrial product.
59-1619137021415 0.967Trimenia sp. CCWD-2000 cytochrome oxidase subunit 1 (coxI) gene, partial cds; mitochondrial.
60-111487487 1.000Schisandra chinensis chloroplast DNA, trnH-psbA intergenic spacer.
61-5557881236 0.923Chloranthus multistachys xanthine dehydrogenase (Xdh) gene, partial cds.
62-111241241 1.000Schisandra chinensis clone C12 microsatellite sequence.
63-111284284 1.000Schisandra chinensis clone C14 microsatellite sequence.
64-111309309 1.000Schisandra chinensis clone AC16 microsatellite sequence.
65-111193193 1.000Schisandra chinensis clone WGA18 microsatellite sequence.
66-111254254 1.000Schisandra chinensis clone WAC21 microsatellite sequence.
67-111264264 1.000Schisandra chinensis clone G24 microsatellite sequence.
68-111265265 1.000Schisandra chinensis clone AC25 microsatellite sequence.
69-111486486 1.000Schisandra chinensis clone WGA27 microsatellite sequence.
70-111248248 1.000Schisandra chinensis clone G35 microsatellite sequence.
71-111474474 1.000Schisandra chinensis clone WGA36 microsatellite sequence.
72-111212212 1.000Schisandra chinensis clone G42 microsatellite sequence.
73-111360360 1.000Schisandra chinensis clone C44 microsatellite sequence.
74-111341341 1.000Schisandra chinensis clone WGA60 microsatellite sequence.
75-111872872 1.000Schisandra chinensis (+)-pinoresinol forming dirigent protein (Dir) mRNA, complete cds.
76-11142144214 1.000Schisandra chinensis cytochrome c oxidase subunit 2 (cox2) gene, exons 1 through 3 and partial cds; mitochondrial.
77-8161453454 0.999Illicium micranthum voucher LMZ002MT04 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.
78-111310310 1.000Illicium henryi maturase (matK) gene, partial cds; chloroplast gene for chloroplast product.
79-111440440 1.000Illicium lanceolatum isolate 5-2 psbA-trnH intergenic spacer, partial sequence; chloroplast.
80-111111539883 0.778Illicium verum isolate 528 small ribosomal protein 4 (rps4) gene, partial cds; chloroplast.
81-23232347816 0.816Illicium verum ribosomal protein S16 (rps16) gene, intron; chloroplast.
82-111228228 1.000Illicium verum voucher PS0005MT03 internal transcribed spacer 2, partial sequence.
83-232373376 0.997Illicium verum voucher PS0005MT02 Ycf5 (ycf5) gene, partial cds; chloroplast.
84-6103429626 0.817Nymphaea lotus isolate lot-w RNA polymerase C-like (rpoC1) gene, partial sequence; chloroplast.
85-111271271 1.000Schisandra rubriflora voucher BONN:Borsch 3477 trnK gene, intron; chloroplast.
86-111296296 1.000Illicium anisatum IaAP3-1 mRNA for APETALA3-like protein, partial cds.
87-9989941080 0.951Euryale ferox chloroplast rpl2, rps19, rpl22, rps3 genes, partial and complete cds.
88-55515501665 0.964Nymphaea odorata RNA polymerase II second largest subunit (RPB2) mRNA, partial cds.
89-8989621101 0.941Nymphaea odorata apocytochrome b (cob) gene, partial cds; mitochondrial.
90-241385468 0.911Schisandra bicolor voucher NMNH 06-8343 RNA polymerase B-like (rpoB2) gene, partial sequence; chloroplast.
91-111272272 1.000Schisandra bicolor voucher NMNH 06-8343 acetyl-CoA carboxylase-D (accD) gene, partial cds; chloroplast.
92-111383383 1.000Schisandra bicolor voucher NMNH 06-8343 NADH dehydrogenase subunit J (ndhJ) gene, partial cds; chloroplast.
93-111670670 1.000Schisandra bicolor voucher NMNH 06-8343 atpF-atpH intergenic spacer, partial sequence; chloroplast.
94-221415415 1.000Schisandra bicolor voucher NMNH 06-8343 psbK-psbI intergenic spacer, partial sequence; chloroplast.
95-10101010561396 0.862Sarcandra glabra phytochrome C (PHYC) gene, partial cds.
96-99820912250 0.955Nuphar advena photosystem I P700 apoprotein A1 (psaA) gene, partial cds; chloroplast.
97-665506811 0.891Cabomba caroliniana internal transcribed spacer 2, partial sequence; 4.5S ribosomal RNA gene, internal transcribed spacer 3, and 5S ribosomal RNA gene, complete sequence; and internal transcribed spacer 4, partial sequence; chloroplast.
98-111690690 1.000Barclaya longifolia ITS1 (partial), 5.8S rRNA gene and ITS2 (partial), isolate NY-376.
99-3336482 0.927Euryale ferox 28S ribosomal RNA (28S rRNA), ca. bp 1922 to 2001 in mature rRNA.
100-20218157355 0.678Cabomba caroliniana tRNA-lys (trnK) gene, chloroplast gene for chloroplast RNA, partial intron sequence.
101-18196190333 0.860Nuphar oguraensis tRNA-lys (trnK) gene, chloroplast gene for chloroplast RNA, partial intron sequence.
102-1118282 1.000Barclaya longifolia chloroplast tRNA-lys (trnK) gene, partial intron sequence.
103-9175465981 0.715Nymphaea sp. EMK-2003 APETALA3-like protein AP3 class II mRNA, partial cds.
104-9115567905 0.726Nymphaea sp. EMK-2003 PISTILLATA-like protein PI mRNA, partial cds.
105-282479769 0.715Euryale ferox chloroplast rpl2, trnH, psbA genes, partial cds and complete sequence.
106-111220220 1.000Euryale ferox DNA, microsatellite Efer004.
107-111201201 1.000Euryale ferox DNA, microsatellite Efer013.
108-111179179 1.000Euryale ferox DNA, microsatellite Efer015.
109-111181181 1.000Euryale ferox DNA, microsatellite Efer023.
110-111181181 1.000Euryale ferox DNA, microsatellite Efer032.
111-111253253 1.000Euryale ferox DNA, microsatellite Efer045.
112-111126126 1.000Euryale ferox DNA, microsatellite Efer047.
113-111288288 1.000Euryale ferox DNA, microsatellite Efer136.
114-111223223 1.000Euryale ferox DNA, microsatellite: Efer008.
115-111284284 1.000Euryale ferox DNA, microsatellite: Efer037.
116-11111561156 1.000Euryale ferox non-symbiotic hemoglobin class 1 gene, partial cds.
117-11112671267 1.000Euryale ferox non-symbiotic hemoglobin class 2 gene, partial cds.
118-1101648728 0.960Euryale ferox 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.
119-111313313 1.000Euryale ferox microsatellite EF-E7-01 sequence.
120-111404404 1.000Euryale ferox microsatellite EF-E19-02 sequence.
121-111504504 1.000Euryale ferox microsatellite EF-E47-05 sequence.
122-111326326 1.000Euryale ferox microsatellite EF-E62-08 sequence.
123-111320320 1.000Euryale ferox microsatellite EF-E79-10 sequence.
124-111810810 1.000Euryale ferox microsatellite EF-E16-12 sequence.
125-111516516 1.000Euryale ferox microsatellite EF-E86-16 sequence.
126-111569569 1.000Euryale ferox microsatellite EF-E89-19 sequence.
127-111509509 1.000Euryale ferox microsatellite EF-E90-20 sequence.
128-111566566 1.000Euryale ferox microsatellite EF-E91-21 sequence.
129-111547547 1.000Euryale ferox microsatellite EF-E95-22 sequence.
130-111448448 1.000Euryale ferox microsatellite EF-E30-03 sequence.
131-111604604 1.000Euryale ferox microsatellite EF-E31-04 sequence.
132-111266266 1.000Euryale ferox microsatellite EF-E48-06 sequence.
133-111524524 1.000Euryale ferox microsatellite EF-E66-11 sequence.
134-111373373 1.000Euryale ferox microsatellite EF-E69-09 sequence.
135-111482482 1.000Euryale ferox microsatellite EF-E83-13 sequence.
136-111555555 1.000Euryale ferox microsatellite EF-E84-14 sequence.
137-111319319 1.000Euryale ferox microsatellite EF-E85-15 sequence.
138-111527527 1.000Euryale ferox microsatellite EF-E88-18 sequence.
139-111652652 1.000Euryale ferox microsatellite EF-E96-23 sequence.
140-111388388 1.000Euryale ferox microsatellite EF-E15 sequence.
141-111735735 1.000Euryale ferox microsatellite EF-E33 sequence.
142-111313313 1.000Euryale ferox microsatellite EF-E39 sequence.
143-111333333 1.000Euryale ferox microsatellite EF-E52 sequence.
144-111734734 1.000Euryale ferox microsatellite EF-E74 sequence.
145-111497497 1.000Euryale ferox microsatellite EF-E81 sequence.
146-111365365 1.000Euryale ferox microsatellite EF-E87 sequence.
147-6027742311018 0.648Nuphar variegata isolate 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.
148-332858873 0.990Nuphar variegata isolate 2 atpB-rbcL intergenic spacer, partial sequence; chloroplast.
149-12121148264 0.882Nuphar orbiculata internal transcribed spacer 1, and 5.8S ribosomal RNA gene, 5' region, partial sequence.
150-13131244299 0.975Nuphar orbiculata 5.8S ribosomal RNA gene, 3' region, and internal transcribed spacer 2, partial sequence.
151-111435435 1.000Austrobaileya scandens clone 21 microsatellite sequence.
152-111450450 1.000Austrobaileya scandens clone 35 microsatellite sequence.
153-111421421 1.000Austrobaileya scandens clone 56 microsatellite sequence.
154-111687687 1.000Austrobaileya scandens clone 61 microsatellite sequence.
155-111412412 1.000Austrobaileya scandens clone 64 microsatellite sequence.
156-111711711 1.000Austrobaileya scandens clone 65 microsatellite sequence.
157-111384384 1.000Austrobaileya scandens clone 67 microsatellite sequence.
158-111253253 1.000Austrobaileya scandens clone 76 microsatellite sequence.
159-33314701518 0.979Nuphar advena ATP synthase alpha chain (atpA) gene, partial cds; chloroplast.
160-11120692069 1.000Austrobaileya scandens class III HD-Zip protein HDZ31 gene, partial cds.
161-121907911 0.998Austrobaileya scandens class III HD-Zip protein HDZ32B gene, partial cds.
162-111635635 1.000Austrobaileya scandens internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence.
163-444567600 0.986Trithuria austinensis voucher JMA 2010.3 CalS5-like protein (CalS5) mRNA, partial cds.
164-55510351398 0.880Hedyosmum sp. SM-2000 phytochrome A (PHYA) gene, partial cds.
165-111573573 1.000Austrobaileya scandens NADH dehydrogenase subunit 1 (nad1) gene, exon 2; mitochondrial gene for mitochondrial product.
166-222549838 0.828Austrobaileya scandens NADH dehydrogenase subunit 1 (nad1) gene, exon 3 and partial cds; mitochondrial genes for mitochondrial products.
167-111781781 1.000N.pumila 28S rRNA gene (partial).
168-222752821 0.958Nuphar japonica NjFIL mRNA for filamentous flower like protein, partial cds.
169-363612864 0.809Nuphar advena AGL2 mRNA, partial cds.
170-111897897 1.000Nuphar advena AP1 (AP1) mRNA, partial cds.
171-51136241073 0.710Nymphaea sp. EMK-2003 AGAMOUS-like protein mRNA, complete cds.
172-111186186 1.000Nuphar advena photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast.
173-111588588 1.000Nuphar advena ATP-depedent Clp protease proteolytic subunit (clpP) gene, partial cds; chloroplast.
174-111690690 1.000Nuphar advena chloroplast envelope membrane protein (cemA) gene, partial cds; chloroplast.
175-111924924 1.000Nuphar advena cytochrome c biogenesis protein (ccsA) gene, partial cds; chloroplast.
176-111744744 1.000Nuphar advena ATP synthase CF0 A chain (atpI) gene, partial cds; chloroplast.
177-111243243 1.000Nuphar advena ATP synthase CF0 C chain (atpH) gene, partial cds; chloroplast.
178-111552552 1.000Nuphar advena ATP synthase CF0 B chain (atpF) gene, partial cds; chloroplast.
179-111402402 1.000Nuphar advena ATP synthase CF1 epsilon chain (atpE) gene, partial cds; chloroplast.
180-111156156 1.000Nuphar advena ribosomal protein L32 (rpl32) gene, partial cds; chloroplast.
181-111345345 1.000Nuphar advena ribosomal protein L20 (rpl20) gene, partial cds; chloroplast.
182-111819819 1.000Nuphar advena ribosomal protein L2 (rpl2) gene, partial cds; chloroplast.
183-111396396 1.000Nuphar advena ribosomal protein L16 (rpl16) gene, partial cds; chloroplast.
184-111366366 1.000Nuphar advena ribosomal protein L14 (rpl14) gene, partial cds; chloroplast.
185-11110081008 1.000Nuphar advena RNA polymerase alpha chain (rpoA) gene, partial cds; chloroplast.
186-111111111 1.000Nuphar advena ribosomal protein L36 (rpl36) gene, partial cds; chloroplast.
187-111204204 1.000Nuphar advena ribosomal protein L33 (rpl33) gene, partial cds; chloroplast.
188-111465465 1.000Nuphar advena ribosomal protein S7 (rps7) gene, partial cds; chloroplast.
189-111654654 1.000Nuphar advena ribosomal protein S3 (rps3) gene, partial cds; chloroplast.
190-111714714 1.000Nuphar advena ribosomal protein S2 (rps2) gene, partial cds; chloroplast.
191-111276276 1.000Nuphar advena ribosomal protein S19 (rps19) gene, partial cds; chloroplast.
192-111303303 1.000Nuphar advena ribosomal protein S18 (rps18) gene, partial cds; chloroplast.
193-111261261 1.000Nuphar advena ribosomal protein S15 (rps15) gene, partial cds; chloroplast.
194-111300300 1.000Nuphar advena ribosomal protein S14 (rps14) gene, partial cds; chloroplast.
195-111369369 1.000Nuphar advena ribosomal protein S12 (rps12) gene, partial cds; chloroplast.
196-111105105 1.000Nuphar advena photosystem II protein T (psbT) gene, partial cds; chloroplast.
197-111129129 1.000Nuphar advena photosystem II protein N (psbN) gene, partial cds; chloroplast.
198-111552552 1.000Nuphar advena Ycf4 (ycf4) gene, partial cds; chloroplast.
199-111378378 1.000Nuphar advena Ycf3 gene, partial cds; chloroplast.
200-111396396 1.000Nuphar advena ribosomal protein S8 (rps8) gene, partial cds; chloroplast.
201-111414414 1.000Nuphar advena ribosomal protein S11 (rps11) gene, partial cds; chloroplast.
202-11120582058 1.000Nuphar advena RNA polymerase beta' chain (rpoC1) gene, partial cds; chloroplast.
203-11132133213 1.000Nuphar advena RNA polymerase beta chain (rpoB) gene, partial cds; chloroplast.
204-111111111 1.000Nuphar advena cytochrome b6/f complex subunit V (petG) gene, partial cds; chloroplast.
205-111480480 1.000Nuphar advena cytochrome b6/f complex subunit IV (petD) gene, partial cds; chloroplast.
206-111639639 1.000Nuphar advena cytochrome b6 (petB) gene, partial cds; chloroplast.
207-111963963 1.000Nuphar advena cytochrome f (petA) gene, partial cds; chloroplast.
208-111102102 1.000Nuphar advena photosystem II protein M (psbM) gene, partial cds; chloroplast.
209-111114114 1.000Nuphar advena photosystem II protein L (psbL) gene, partial cds; chloroplast.
210-111183183 1.000Nuphar advena photosystem II protein K (psbK) gene, partial cds; chloroplast.
211-111120120 1.000Nuphar advena photosystem II protein J (psbJ) gene, partial cds; chloroplast.
212-111108108 1.000Nuphar advena photosystem II protein I (psbI) gene, partial cds; chloroplast.
213-111219219 1.000Nuphar advena photosystem II phosphoprotein (psbH) gene, partial cds; chloroplast.
214-111117117 1.000Nuphar advena cytochrome b559 beta chain (psbF) gene, partial cds; chloroplast.
215-111249249 1.000Nuphar advena cytochrome b559 alpha chain (psbE) gene, partial cds; chloroplast.
216-11110591059 1.000Nuphar advena photosystem II protein D1 (psbA) gene, partial cds; chloroplast.
217-111132132 1.000Nuphar advena photosystem I subunit IX (psaJ) gene, partial cds; chloroplast.
218-111108108 1.000Nuphar advena photosystem I subunit VIII (psaI) gene, partial cds; chloroplast.
219-111243243 1.000Nuphar advena photosystem I subunit VII (psaC) gene, partial cds; chloroplast.
220-11122022202 1.000Nuphar advena photosystem I P700 apoprotein A2 (psaB) gene, partial cds; chloroplast.
221-1118787 1.000Nuphar advena cytochrome b6/f complex subunit VIII (petN) gene, partial cds; chloroplast.
222-22293105 0.943Nuphar advena cytochrome b6/f complex subunit VI (petL) gene, partial cds; chloroplast.
223-111741741 1.000Nuphar advena AP3-like protein gene, partial cds.
224-463687927 0.797Nymphaea hybrid cultivar AGL6 mRNA for homeotic AGL6 protein, complete cds, cultivar: Yellow Prince.
225-111648648 1.000Nuphar advena voucher FLAS:Yoo & Koh 1000 SEP3 (SEP3) mRNA, partial cds.
226-33311961231 0.989Brasenia schreberi xanthine dehydrogenase (Xdh) gene, partial cds.
227-111432432 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
228-111498498 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
229-111669669 1.000Nuphar lutea TG/GA dinucleotide repeat microsatellite sequence.
230-111540540 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
231-111538538 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
232-11110441044 1.000Nuphar lutea GA/GT dinucleotide repeat microsatellite sequence.
233-111303303 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
234-111679679 1.000Nuphar lutea TG dinucleotide repeat microsatellite sequence.
235-111824824 1.000Nuphar lutea CT dinucleotide repeat microsatellite sequence.
236-111464464 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
237-111169169 1.000Nuphar lutea GA dinucleotide repeat microsatellite sequence.
238-22212851535 0.919Trimenia moorei NADH dehydrogenase subunit I (nad1) gene, exons b and c, intron 2, and partial cds; mitochondrial gene for mitochondrial product.
239-111775775 1.000Trimenia moorei voucher Floyd s.n. (NSW) NADH dehydrogenase subunit F (ndhF) gene, partial cds; plastid.
240-454404419 0.987Nuphar sp. Palmer 689 ATPase subunit 8 (atp8) gene, partial cds; mitochondrial.
241-11118781878 1.000Kadsura japonica KjPI gene for PISTILLATA-like protein, partial cds.
242-111600600 1.000Kadsura japonica chloroplast rps16 gene, intron, partial sequence, isolate: 4KJ.
243-111682682 1.000Kadsura japonica chloroplast trnH, psbA genes, complete sequence and partial cds.
244-333349390 0.965Cabomba sp. Qiu 97027 small subunit ribosomal protein (rps11) gene, partial cds; mitochondrial gene for mitochondrial product.
245-232181181 1.000Kadsura japonica ATP synthase F0 subunit 9 (atp9) gene, partial cds; mitochondrial.
246-111749749 1.000Schisandra nigra female-specific SCAR marker.
247-111135135 1.000Schisandra lancifolia voucher USDA QLG 062B atpF-atpH intergenic spacer, partial sequence; chloroplast.
248-111683683 1.000Schisandra arisanensis chloroplast rpl2, trnH, psbA genes, partial cds and complete sequence.
249-11111271127 1.000Nymphaea odorata RNA polymerase II largest subunit (RPB1) gene, partial cds.
250-22116261632 0.998Nymphaea lotus RNA polymerase I largest subunit (rpa1) mRNA, partial cds.
251-442600941 0.822Nymphaea sp. EMK-2003 AGAMOUS-like protein mRNA, partial cds.
252-11121412141 1.000Nymphaea odorata NymodLFY protein (NymodLFY) gene, complete cds.
253-22211881245 0.977Nymphaea odorata phytochrome A (PHYA) gene, exon 1 and partial cds.
254-22110191023 0.998Nymphaea colorata NcINO mRNA for putative transcription factor, complete cds.
255-111471471 1.000Nymphaea alba NaGAPDH mRNA for Glyceraldehyde 3-phosphate dehydrogenase, partial cds.
256-111792792 1.000Nymphaea alba 5-enol-pyruvylshikimate-phosphate synthase (EPSPS) mRNA, partial cds.
257-1748113421442 0.953Nymphaea violacea voucher HELLQ 07 PsbE (psbE) gene, partial cds; psbE-petL intergenic spacer, complete sequence; and PetL (petL) gene, partial cds; chloroplast.
258-19672505593 0.965Nymphaea candida voucher 719-01 ribosomal protein L32 (rpl32) gene, partial cds; and rpl32-trnL intergenic spacer, partial sequence; chloroplast.
259-11113321332 1.000N.alba mitochondria DNA coxII intron.
260-111567567 1.000N.alba gene for phytochrome.
261-111134134 1.000Nymphaea tuberosa small subunit ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, complete sequence, partial sequence representing helix 6.
262-221279283 0.993Nymphaea caerulea internal transcribed spacer 1, complete sequence.
263-221257257 1.000Nymphaea nouchali isolation-source Paikan blue colored flower internal transcribed spacer 2, complete sequence.
264-111444444 1.000N.caerula chloroplast ndhB mRNA.
265-471483523 0.953Nymphaea lotus isolate lot-w PsbA (psbA) gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast.
266-111650650 1.000Nymphaea nouchali 28S ribosomal RNA gene, partial sequence.
267-111645645 1.000Nymphaea mexicana internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
268-111354354 1.000Nymphaea tetragona clone 1 ty3/gypsy-like retrotransposon reverse transcriptase (RT) gene, partial cds.
269-252320354 0.975Brasenia schreberi clone 2 copia-like retrotransposon reverse transcriptase (RT) gene, partial cds.
270-111353353 1.000Nymphaea tetragona clone 5 ty3/gypsy-like retrotransposon reverse transcriptase-like (RT) gene, partial sequence.
271-111344344 1.000Nymphaea tetragona clone 3 athila-like retrotransposon reverse transcriptase (RT) gene, partial cds.
272-121288288 1.000Nymphaea tetragona clone 2 athila-like retrotransposon reverse transcriptase-like (RT) gene, partial sequence.
273-141358439 0.933Nymphaea tetragona clone 5 copia-like retrotransposon reverse transcriptase (RT) pseudogene, partial sequence.
274-111436436 1.000Nymphaea tetragona clone 4 copia-like retrotransposon reverse transcriptase (RT) pseudogene, partial sequence.
275-111520520 1.000Nymphaea tetragona ribosomal protein L2 (rpl2) gene, partial cds; mitochondrial.
276-222344649 0.765Nymphaea tetragona cytochrome c oxidase subunit 2 (cox2) gene, partial cds; mitochondrial.
277-111272272 1.000Nymphaea tetragona ribosomal protein S12 (rps12) gene, partial cds; mitochondrial.
278-111190190 1.000Nymphaea tetragona ribosomal protein S14 (rps14) gene, partial cds; mitochondrial.
279-111238238 1.000Nymphaea tetragona succinate dehydrogenase subunit 3 (sdh3) gene, partial cds; mitochondrial.
280-111526526 1.000Nymphaea colorata NcCRC mRNA for CRABS CLAW like protein, partial cds.
281-222401421 0.976Cabomba caroliniana CcFIL mRNA for FILAMENTOUS FLOWER like protein, partial cds.
282-3111605705 0.955Nymphaea colorata x Nymphaea gigantea genotype 18x internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
283-221474649 0.865Nymphaea colorata tRNA-Lys (trnK) gene, intron; chloroplast.
284-11112951295 1.000Nymphaea colorata RNA polymerase II second largest subunit (RPB2) mRNA, partial cds.
285-111506506 1.000Nymphaea sp. EMK-2003 PISTILLATA-like protein PI gene, partial cds.
286-111479479 1.000Nymphaea sp. EMK-2003 APETALA3-like protein AP3 gene, partial cds.
287-11120312031 1.000Nymphaea sp. EMK-2003 AGAMOUS-like protein gene, partial cds.
288-11119361936 1.000Nymphaea sp. EMK-2003 AGAMOUS-like protein gene, partial cds.
289-11116351635 1.000Nymphaea lotus RNA polymerase III large subunit (rpc1) mRNA, partial cds.
290-111572572 1.000Nymphaea capensis isolate cap-db PsbA (psbA) gene, partial sequence; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast.
291-232473493 0.978Nymphaea sp. Bergthorsson 0401 ATPase subunit 4 (atp4) gene, partial cds; mitochondrial.
292-232602628 0.984Nymphaea sp. Bergthorsson 0401 cytochrome c biogenesis ccmC (ccmC) gene, partial cds; mitochondrial.
293-232361391 0.974Nymphaea sp. Bergthorsson 0401 cytochrome oxidase subunit III (cox3) gene, partial cds; mitochondrial.
294-222652686 0.975Nymphaea sp. Bergthorsson 0401 NADH dehydrogenase subunit 2 (nad2) gene, exon 4 and partial cds; mitochondrial.
295-232335341 0.991Nymphaea sp. Bergthorsson 0401 NADH dehydrogenase subunit 3 (nad3) gene, partial cds; mitochondrial.
296-222499533 0.968Nymphaea sp. Bergthorsson 0401 NADH dehydrogenase subunit 4 (nad4) gene, exon 4 and partial cds; mitochondrial.
297-111423423 1.000Nymphaea sp. Bergthorsson 0401 NADH dehydrogenase subunit 7 (nad7) gene, exons 1 and 4 and partial cds; mitochondrial.
298-232447496 0.948Nymphaea sp. Bergthorsson 0401 ribosomal protein L16 (rpl16) gene, partial cds; mitochondrial.
299-222428448 0.978Nymphaea sp. Bergthorsson 0401 ribosomal protein S1 (rps1) gene, partial cds; mitochondrial.
300-222395416 0.975Nymphaea sp. Bergthorsson 0401 ribosomal protein S7 (rps7) gene, partial cds; mitochondrial.
301-232424466 0.951Nymphaea sp. Bergthorsson 0401 succinate oxido-reductase subunit 4 (sdh4) gene, partial cds; mitochondrial.
302-131245245 1.000Nymphaea rubra clone Nyrclo10 internal transcribed spacer 2, partial sequence.
303-111831831 1.000Nymphaea jamesoniana mRNA for putative wuschel homeobox protein (wus gene).
304-111597597 1.000Nymphaea jamesoniana mRNA for putative wuschel-related homeobox 5 protein (wox5 gene).
305-222123164 0.875Nymphaea jamesoniana partial wox2 gene for putative wuschel-related homeobox 2 protein.
306-111123123 1.000Nymphaea jamesoniana partial wox3 gene for putative wuschel-related homeobox 3 protein.
307-111123123 1.000Nymphaea jamesoniana partial wox9 gene for putative wuschel-related homeobox 9 protein.
308-111123123 1.000Nymphaea jamesoniana partial wox11 gene for putative wuschel-related homeobox 11 protein.
309-111870870 1.000Nymphaea petersiana partial matR gene for maturase R, isolate NY-058.
310-271213287 0.779Nymphaea immutabilis subsp. kimberleyensis isolate NY380 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
311-161129129 1.000Nymphaea alba var. rubra isolate NyaS1 internal transcribed spacer 1, partial sequence.
312-111349349 1.000Nuphar submersa DNA, microsatellite:Nsub033.
313-111123123 1.000Nuphar submersa DNA, microsatellite:Nsub043.
314-111144144 1.000Nuphar submersa DNA, microsatellite:Nsub049.
315-111400400 1.000Nuphar submersa DNA, microsatellite:Nsub053.
316-111145145 1.000Nuphar submersa DNA, microsatellite:Nsub061.
317-111360360 1.000Nuphar submersa DNA, microsatellite:Nsub091.
318-111420420 1.000Nuphar submersa DNA, microsatellite:Nsub106.
319-111349349 1.000Nuphar submersa DNA, microsatellite:Nsub109.
320-111235235 1.000Nuphar submersa DNA, microsatellite:Nsub111.
321-111296296 1.000Nuphar submersa DNA, microsatellite:Nsub122.
322-111179179 1.000Nuphar submersa DNA, microsatellite:Nsub126.
323-111221221 1.000Nuphar submersa DNA, microsatellite:Nsub145.
324-1119393 1.000Nuphar submersa DNA, microsatellite:Nsub176.
325-361611687 0.943Victoria cruziana 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence.
326-111560560 1.000Brasenia schreberi BsFIL mRNA for FILAMENTOUS FLOWER like protein, partial cds.
327-111353353 1.000Brasenia schreberi clone 1 copia-like retrotransposon reverse transcriptase (RT) gene, partial cds.
328-111717717 1.000Cabomba caroliniana CcYAB2 mRNA for YABBY5 like protein, partial cds.
329-111752752 1.000Cabomba caroliniana CcINO mRNA for INO-like YABBY protein, complete cds.
330-111647647 1.000Cabomba caroliniana CcCRC mRNA for CRC-like YABBY protein, complete cds.
331-111540540 1.000Cabomba caroliniana CcYAB2-2 mRNA for YAB2-like YABBY protein, partial cds.
332-11121802180 1.000Cabomba caroliniana CcYAB2 gene for YAB5-like YABBY protein, partial cds.
333-11125452545 1.000Cabomba caroliniana CcFIL gene for FIL-like YABBY protein, partial cds.
334-11123382338 1.000Cabomba caroliniana CcINO gene for INO-like YABBY protein, complete cds.
335-11114101410 1.000Cabomba caroliniana CcCRC gene for CRC-like YABBY protein, complete cds.
336-11121092109 1.000Cabomba caroliniana CcC3HDZ1 mRNA for class III HD-Zip protein, partial cds.
337-111859859 1.000Cabomba caroliniana mRNA for glyceraldehyde 3-phosphate dehydrogenase (GAPDH) homolog, partial cds.
338-361646988 0.768Cabomba furcata small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence.
339-111705705 1.000Cabomba caroliniana voucher FLAS:Yoo 10020 AP1 (AP1) mRNA, partial cds.
340-121678678 1.000Cabomba caroliniana voucher FLAS:Yoo 10020 Bsister2 (Bs2) mRNA, partial cds.
341-11156945694 1.000Cabomba caroliniana clone CabUTghHesler CalS5-like protein (CalS5) mRNA, partial cds.
342-111772772 1.000Cabomba caroliniana voucher Les s.n. (CONN) NADH dehydrogenase subunit F (ndhF) gene, partial cds; plastid.
343-4391245246 0.996Cabomba aquatica voucher Van Valkenburg 3320 trnH-psbA intergenic spacer, partial sequence; chloroplast.
344-3381553553 1.000Cabomba caroliniana voucher Van Valkenburg 3403 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) gene, partial cds; chloroplast.
345-111147147 1.000Cabomba caroliniana tRNA-lys (trnK) gene, chloroplast gene for chloroplast RNA, partial intron sequence.
346-111257257 1.000Cabomba caroliniana maturase K (matK) gene, chloroplast gene encoding chloroplast protein, partial cds.
347-2225487 0.810Ondinea purpurea maturase K (matK) gene, chloroplast gene encoding chloroplast protein, partial cds.
348-111610610 1.000Cabomba sp. putative 5.8S rRNA gene and internal transcribed spacers.
349-1315191100 0.657Victoria regia 5S rRNA gene and IGS, specimen voucher BONN:Ed081, clone ED815SC2.
350-1116969 1.000Victoria amazonica tRNA-lys (trnK) gene, chloroplast gene for chloroplast RNA, partial intron sequence.
351-222267311 0.929Victoria amazonica rps10 gene, partial sequence; mitochondrial gene for mitochondrial product.
352-11111401140 1.000Trithuria submersa phytochrome C (PHYC) gene, partial cds.
353-11119691969 1.000Trithuria submersa NADH dehydrogenase subunit B (ndhB) gene, partial cds; and tRNA-Leu (trnL) gene, partial sequence; chloroplast.
354-11361324775 0.876Trithuria cowieana voucher Macfarlane & al. 4217 (MW) NADH dehydrogenase subunit F (ndhF) gene, partial cds; plastid.
355-11341395695 0.906Trithuria lanterna voucher Macfarlane & al. 4321 (MW) internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
356-11126442644 1.000Cabomba aquatica mRNA for putative protein kinase tousled (TSL gene).
357-111791791 1.000Cabomba aquatica microRNA for novel locus Caq-MIR164a.
358-11113441344 1.000Cabomba aquatica microRNA for novel locus Caq-MIR164b.
359-111660660 1.000Cabomba aquatica microRNA for novel locus Caq-MIR164c.
360-12128644670 0.807Cabomba aquatica partial ETT gene for ETTIN protein, exons 1-12.
361-11123962396 1.000Cabomba aquatica mRNA for ARF4 protein.
362-11159005900 1.000Cabomba aquatica partial ARF4 gene, exons 1-11.
363-11129032903 1.000Cabomba aquatica mRNA for putative auxin response factor 2 (arf2 gene).
364-11128292829 1.000Cabomba aquatica partial mRNA for putative auxin response factor 6 (arf6 gene).
365-11126652665 1.000Cabomba aquatica partial mRNA for putative auxin response factor 8 (arf8 gene).
366-11114551455 1.000Cabomba aquatica mRNA for NACa protein.
367-11118431843 1.000Nymphaea hybrid cultivar Ap2 mRNA for homeotic APETALA2 protein, complete cds, cultivar: Yellow Prince.
368-111496496 1.000Nymphaea hybrid cultivar EF1a mRNA for elongation factor 1-alpha, partial cds, cultivar: Yellow Prince.
369-111901901 1.000Nymphaea hybrid cultivar act11 mRNA for actin 11, partial cds, cultivar: Yellow Prince.
370-111590590 1.000Nymphaea hybrid cultivar AP47 mRNA for adaptor complexes medium subunit, partial cds.
371-111390390 1.000Nymphaea hybrid cultivar UBC16 mRNA for ubiquitin-conjugating enzyme, partial cds.
372-111499499 1.000Nymphaea hybrid cultivar UBQ11 mRNA for ubiquitin, partial cds.
373-54584390829 0.911Chloranthus fortunei ribosomal protein L20 (rpl20) gene, partial cds; and rpl20-rps12 intergenic spacer, partial sequence; chloroplast.
374-111825825 1.000Chloranthus spicatus MADS-box protein (AP1) mRNA, complete cds.
375-121774830 0.966Chloranthus spicatus transcription factor AP3 (AP3) mRNA, complete cds.
376-111845845 1.000Chloranthus spicatus transcription factor SEP3 (SEP3) mRNA, partial cds.
377-111859859 1.000Chloranthus spicatus AGAMOUS-like protein mRNA, partial cds.
378-111354354 1.000Chloranthus spicatus ribosomal protein S3 (rps3) gene, exons 2, 3 and partial cds; mitochondrial.
379-111959959 1.000Chloranthus spicatus MADS box containing protein PI mRNA, partial cds.
380-13182641735 0.915Sarcandra glabra isolate shawpc0609I 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence.
381-774799986 0.923Chloranthus erectus chloroplast rpl16 gene, intron, partial sequence.
382-23231362634 0.974Hedyosmum parvifolium internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence.
383-262235516 0.650Sarcandra glabra chloroplast rpl2, trnH, psbA genes, partial cds and complete sequence.
384-111378378 1.000Chloranthus serratus CsYAB1 mRNA for YABBY like transcription factor, partial cds.
385-111339339 1.000Chloranthus serratus CsYAB2 mRNA for YABBY like transcription factor, partial cds.
386-131818980 0.900Hedyosmum orientale transcription factor PI variant 1B (PI_1) mRNA, complete cds, alternatively spliced.
387-111880880 1.000Hedyosmum orientale transcription factor PI (PI_2) mRNA, complete cds.
388-111958958 1.000Hedyosmum orientale transcription factor PI (PI_3) mRNA, complete cds.
389-121831832 0.999Hedyosmum orientale transcription factor AP3 (AP3_1) mRNA, complete cds.
390-221279281 0.996Hedyosmum grisebachii rpl20-rps12 intergenic spacer, partial sequence; chloroplast.
391-111233233 1.000Trithuria austinensis voucher Macfarlane 4163 & Hearn, 1 (PERTH) internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence.
392-111259259 1.000Trithuria occidentalis voucher Keighery G.J. 4204 (PERTH) maturase K (matK) gene, partial cds; plastid.
393-121215215 1.000Sarcandra glabra voucher PS0548MT03 internal transcribed spacer 2, partial sequence.
394-111285285 1.000Sarcandra glabra clone SG01C19 microsatellite sequence.
395-111250250 1.000Sarcandra glabra clone SG02C27 microsatellite sequence.
396-111273273 1.000Sarcandra glabra clone SG03C50 microsatellite sequence.
397-111338338 1.000Sarcandra glabra clone SG04C62 microsatellite sequence.
398-111388388 1.000Sarcandra glabra clone SG05C70 microsatellite sequence.
399-111321321 1.000Sarcandra glabra clone SG06C76 microsatellite sequence.
400-111404404 1.000Sarcandra glabra clone SG07C101 microsatellite sequence.
401-111341341 1.000Sarcandra glabra clone SG08C120 microsatellite sequence.
402-111337337 1.000Sarcandra glabra clone SG09C143 microsatellite sequence.
403-111378378 1.000Sarcandra glabra clone SG10C149 microsatellite sequence.
404-111324324 1.000Sarcandra glabra clone SG11C51 microsatellite sequence.
405-111504504 1.000Sarcandra glabra clone SG12C64 microsatellite sequence.
406-111342342 1.000Sarcandra glabra clone SG13C66 microsatellite sequence.
407-111373373 1.000Sarcandra glabra clone SG14C82 microsatellite sequence.
408-111293293 1.000Sarcandra glabra clone SG15C99 microsatellite sequence.
409-111466466 1.000Sarcandra glabra clone SG16C142 microsatellite sequence.
410-111355355 1.000Sarcandra glabra clone SG17C144 microsatellite sequence.
411-111421421 1.000Sarcandra glabra clone SG18C152 microsatellite sequence.
412-11116311631 1.000Ascarina rubricaulis large subunit ribosomal RNA gene, partial sequence; mitochondrial.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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