Cluster set at subtree whose root is Fornicata (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-825214751622 0.443Giardia sp. mRNA for microtubule-associated protein beta-giardin.
5-103346231399 0.684Spironucleus barkhanus mRNA for elongation factor 1 alpha, partial cds.
16-528113982354 0.625Giardia microti small subunit ribosomal RNA gene, complete sequence.
18-1718512081630 0.901Trepomonas agilis 18S ribosomal RNA gene.
19-1947129101878 0.612Spironucleus vortens alpha-tubulin gene, complete cds.
29-121689021358 0.860Kipferlia bialata gene for beta-tubulin, partial cds, strain: NY0166.
30-910716572278 0.800Spironucleus barkhanus cytosolic heat shock protein 90 (HSP90) mRNA, complete cds.
42-41511264513 0.585Giardia psittaci small subunit ribosomal RNA gene, partial sequence.
46-1111114791446 0.652Diplomonad ATCC50330 small subunit rRNA gene, copy 1, partial sequence.
146-44311951371 0.904Ergobibamus cyprinoides gene for translation elongation factor 1 alpha, complete cds, strain: CL.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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