Cluster set at subtree whose root is Smilodon (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
00111132132 1.00012S rRNA [Smilodon fatalis=saber-toothed cats, Mitochondrial, 132 nt].
11111388388 1.000Smilodon populator isolate ZMA20.041 16S ribosomal RNA gene, partial sequence; mitochondrial.
22111136136 1.000Smilodon populator isolate ZMA20.041 ATPase 8 (ATP8) gene, partial cds; mitochondrial.
33111297297 1.000Smilodon populator isolate ZMA20.041 NADH dehydrogenase subunit 5 (ND5) gene, partial cds; mitochondrial.
44111394394 1.000Smilodon populator isolate ZMA20.041 12S ribosomal RNA gene, partial sequence; mitochondrial.
55111291291 1.000Smilodon populator isolate ZMA20.041 cytochrome b (cytb) gene, partial cds; mitochondrial.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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