Cluster set at subtree whose root is Hyperoartia (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
2-17504351720 0.588Ichthyomyzon greeleyi voucher G10 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; tRNA-Arg gene, complete sequence; and NADH dehydrogenase subunit 4L (ND4L) gene, complete cds; mitochondrial.
3-4728295542102 0.688Lampetra sp. CSM-2009 mitochondrial cytb gene (partial), ATP8 gene and ATP6 gene (partial), haplotype 38.
4-99044741095 0.843Lethenteron reissneri mitochondrial COI gene for cytochrome oxidase subunit I, partial cds, southern form.
5-6243463575 0.945Lampetra planeri isolate 3hlpsad2 16S ribosomal RNA gene, partial sequence; mitochondrial.
6-1460254701119 0.549Ichthyomyzon fossor voucher F02 NADH dehydrogenase subunit 6 (ND6) gene, complete cds; and D-loop, complete sequence; mitochondrial.
7-4562758872 0.879Ichthyomyzon unicuspis voucher U02 ATPase subunit 8 (ATPase8) and ATPase subunit 6 (ATPase6) genes, complete cds; mitochondrial.
10-52348781727 0.894Lampetra appendix clone LaVLR.35 variable lymphocyte receptor mRNA, complete cds.
12-302319507673 0.958Lampetra ayresii voucher WTU:UW118537 cytochrome oxidase subunit 1 (COI) gene, partial cds; mitochondrial.
25-27618270429 0.885Lampetra sp. 'Adige Basin' cytochrome b (cytb) gene, partial cds; mitochondrial.
39-47417381785 0.990Lampetra aepyptera 18S ribosomal RNA (18S rRNA), 5' end.
82-5141966966 1.000Ichthyomyzon unicuspis voucher U04 NADH dehydrogenase subunit 1 (ND1) gene, complete cds; mitochondrial.
83-52925862647 0.521Entosphenus tridentatus voucher McKen22 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp and tRNA-Ala genes, complete sequence; and tRNA-Asn gene, partial sequence; mitochondrial.
84-5121761763 0.998Ichthyomyzon greeleyi voucher G12 tRNA-Asp gene, complete sequence; and cytochrome oxidase subunit 2 (COII) gene, complete cds; mitochondrial.
86-52016351029 0.854Ichthyomyzon unicuspis voucher U02 NADH dehydrogenase subunit 4 (ND4) gene, partial cds; mitochondrial.
87-62725561015 0.910Entosphenus tridentatus voucher 94-3 NADH dehydrogenase subunit 4 (ND4) gene, partial cds; tRNA-His, tRNA-Ser, and tRNA-Leu genes, complete sequence; and NADH dehydrogenase subunit 5 (ND5) gene, partial cds; mitochondrial.
106-663710732 0.987Lampetra tridentatus preprogonadotropin-releasing hormone III mRNA, complete cds.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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