Cluster set at subtree whose root is Nucleariidae and Fonticula group (rel. 194)

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Cluster IDParent clusterTaxIDsGIsGeneraLminLmaxMAD1Defline of longest sequenceTree2
0-68218053018 0.758Nuclearia moebiusi 18S small subunit ribosomal RNA, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA, partial sequence.
1-111705705 1.000Nuclearia moebiusi strain CCAP1552/3 beta-tubulin gene, partial cds.
2-11136913691 1.000Nuclearia simplex 28S large subunit ribosomal RNA gene, complete sequence.
3-2328931128 0.864Nuclearia simplex actin mRNA, complete cds.
4-11112831283 1.000Nuclearia simplex strain CCAP1552/4 ef1a mRNA, partial cds.
5-22214161489 0.975Fonticula alba strain ATCC 38817 cytosolic heat shock protein 70 mRNA, partial cds.
6-111993993 1.000Nuclearia simplex strain CCAP1552/4 alpha-tubulin mRNA, partial cds.
7-221937939 0.999Nuclearia sp. W3 small subunit ribosomal RNA gene, partial sequence.
8-111977977 1.000Nuclearia sp. 2H small subunit ribosomal RNA gene, partial sequence.
9-11111691169 1.000Fonticula alba strain ATCC 38817 beta-tubulin gene, partial cds.
10-11118221822 1.000Fonticula alba strain ATCC 38817 elongation factor 1-alpha mRNA, partial cds.

  1 Maximum Alignment Density
   2 Trees are unrooted RAxML trees based on Muscle alignments. Expect performance to deteriorate with low MAD scores, large number of taxa, and high sequence divergence (largely owing to alignment problems). Only trees for (taxon) phylogenetically informative clusters with fewer than 1000 sequences are generated.


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