Pleurodira (rel. 194): Cluster 37 (up to parent cluster)

Number of sequences (GIs)3
Number of distinct taxon IDs (TIs)3
Shortest sequence215 nt -- Chelodina novaeguineae u17 snoRNA gene.
Longest sequence215 nt -- Chelodina novaeguineae u17 snoRNA gene.
Maximum alignment density1 1.000
Cluster statusCluster is redundant with its child cluster
View tree
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  

Download cluster...
  • Unaligned cluster in Fasta format
Download alignments...
  • Muscle alignment in Fasta format (Color view)
Download a RAxML optimal tree with branch lengths (Muscle alignment)...
Download a midpoint rooted RAxML optimal tree with branch lengths (Muscle alignment)...


NCBI taxon name GI TI Length Defline
Chelodina novaeguineae 32452656 200900 215 Chelodina novaeguineae u17 snoRNA gene.
Chelus fimbriata 32452652 44495 215 Chelus fimbriata u17 snoRNA gene.
Pelomedusa subrufa 17432182 44522 215 Pelomedusa subrufa U17 snoRNA gene.


Back to taxonomic hierarchy view
Back to Phylota Browser home