Testudines (rel. 194): Cluster 86

Number of sequences (GIs)109
Number of distinct taxon IDs (TIs)50
Shortest sequence544 nt -- Cuora yunnanensis voucher KIZPG1 brain-derived neurotrophic factor gene, partial cds.
Longest sequence1011 nt -- Trachemys scripta elegans brain-derived neurotrophic factor transcript variant 5 (BDNF) mRNA, complete cds, alternatively spliced.
Maximum alignment density1 0.647
Cluster statusCluster has 2 child clusters
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  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  

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NCBI taxon name GI TI Length Defline
Actinemys marmorata 264681766 335395 653 Actinemys marmorata brain-derived neurotrophic factor (BDNF) gene, partial cds.
Astrochelys radiata 374115365 66190 656 Astrochelys radiata voucher ZSM120/2009 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Batagur trivittata 264681752 686919 624 Batagur trivittata brain-derived neurotrophic factor (BDNF) gene, partial cds.
Caretta caretta 375174433 8467 559 Caretta caretta haplotype 1 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Caretta caretta 213494291 8467 718 Caretta caretta isolate CC_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Caretta caretta 213494293 8467 718 Caretta caretta isolate CC_Atlantic brain-derived neurotrophic factor (BDNF) gene, partial cds.
Carettochelys insculpta 264681754 44489 662 Carettochelys insculpta brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 213494303 8469 718 Chelonia mydas isolate CM_EasternPacific_2 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 213494301 8469 718 Chelonia mydas isolate CM_EasternPacific_1 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 213494299 8469 718 Chelonia mydas isolate CM_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 213494307 8469 717 Chelonia mydas isolate CM_Atlantic_2 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 213494305 8469 717 Chelonia mydas isolate CM_Atlantic_1 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 264681756 8469 662 Chelonia mydas brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 375174437 8469 559 Chelonia mydas haplotype 3 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 375174441 8469 559 Chelonia mydas haplotype 5 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelonia mydas 375174439 8469 559 Chelonia mydas haplotype 4 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelydra serpentina 213494321 8475 718 Chelydra serpentina brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelydra serpentina 399144111 8475 670 Chelydra serpentina brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chelydra serpentina 264681760 8475 662 Chelydra serpentina brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chinemys reevesi 157060776 284239 600 Chinemys reevesi brain-derived neurotrophic factor (BDNF) gene, partial cds.
Chrysemys picta 264681758 8479 662 Chrysemys picta brain-derived neurotrophic factor (BDNF) gene, partial cds.
Cuora amboinensis 386648728 74909 611 Cuora amboinensis voucher FMNH 255262 brain-derived neurotrophic factor gene, partial cds.
Cuora amboinensis 386648730 74909 611 Cuora amboinensis voucher TNHC 62989 brain-derived neurotrophic factor gene, partial cds.
Cuora aurocapitata 386648734 72008 595 Cuora aurocapitata voucher MVZ 234642 brain-derived neurotrophic factor gene, partial cds.
Cuora aurocapitata 386648732 72008 611 Cuora aurocapitata voucher FMNH 261570 brain-derived neurotrophic factor gene, partial cds.
Cuora bourreti 386648736 241441 611 Cuora bourreti voucher FMNH 261574 brain-derived neurotrophic factor gene, partial cds.
Cuora bourreti 386648738 241441 611 Cuora bourreti voucher FMNH 261579 brain-derived neurotrophic factor gene, partial cds.
Cuora flavomarginata 386648740 204965 611 Cuora flavomarginata voucher HBS41895 brain-derived neurotrophic factor gene, partial cds.
Cuora flavomarginata 386648742 204965 611 Cuora flavomarginata voucher MVZ 230464 brain-derived neurotrophic factor gene, partial cds.
Cuora galbinifrons 386648744 204968 611 Cuora galbinifrons voucher FMNH 255694 brain-derived neurotrophic factor gene, partial cds.
Cuora galbinifrons 386648746 204968 611 Cuora galbinifrons voucher FMNH 256544 brain-derived neurotrophic factor gene, partial cds.
Cuora mccordi 386648748 241437 611 Cuora mccordi voucher HBS41892 brain-derived neurotrophic factor gene, partial cds.
Cuora mccordi 386648750 241437 611 Cuora mccordi voucher HBS41893 brain-derived neurotrophic factor gene, partial cds.
Cuora mouhotii 386648754 260627 611 Cuora mouhotii voucher HBS41868 brain-derived neurotrophic factor gene, partial cds.
Cuora mouhotii 386648752 260627 611 Cuora mouhotii voucher HBS41865 brain-derived neurotrophic factor gene, partial cds.
Cuora pani 386648756 176193 611 Cuora pani voucher HBS41890 brain-derived neurotrophic factor gene, partial cds.
Cuora pani 386648758 176193 611 Cuora pani voucher HBS41896 brain-derived neurotrophic factor gene, partial cds.
Cuora picturata 386648760 241440 611 Cuora picturata voucher FMNH 261575 brain-derived neurotrophic factor gene, partial cds.
Cuora picturata 386648762 241440 611 Cuora picturata voucher HBS38448 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648792 176192 594 Cuora trifasciata voucher KFBG 042095629 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648764 176192 611 Cuora trifasciata voucher 88R148 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648766 176192 611 Cuora trifasciata voucher A00774 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648768 176192 611 Cuora trifasciata voucher A20024 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648770 176192 611 Cuora trifasciata voucher trif08 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648772 176192 611 Cuora trifasciata voucher trif09 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648774 176192 611 Cuora trifasciata voucher trif10 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648776 176192 611 Cuora trifasciata voucher trif11 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648778 176192 611 Cuora trifasciata voucher KFBG 029122546 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648780 176192 611 Cuora trifasciata voucher KFBG 021325338 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648782 176192 611 Cuora trifasciata voucher KFBG 030278065 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648784 176192 611 Cuora trifasciata voucher KFBG 030552847 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648786 176192 611 Cuora trifasciata voucher KFBG 030566034 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648788 176192 611 Cuora trifasciata voucher KFBG 030567630 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648790 176192 611 Cuora trifasciata voucher KFBG 042041021 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648794 176192 611 Cuora trifasciata voucher KFBG 042100272 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648796 176192 611 Cuora trifasciata voucher KFBG 042110519 brain-derived neurotrophic factor gene, partial cds.
Cuora trifasciata 386648798 176192 611 Cuora trifasciata voucher KFBG 042371302 brain-derived neurotrophic factor gene, partial cds.
Cuora yunnanensis 386648800 176194 544 Cuora yunnanensis voucher KIZPG1 brain-derived neurotrophic factor gene, partial cds.
Cuora zhoui 386648802 204956 611 Cuora zhoui voucher HBS41855 brain-derived neurotrophic factor gene, partial cds.
Cuora zhoui 386648804 204956 611 Cuora zhoui voucher HBS41856 brain-derived neurotrophic factor gene, partial cds.
Dermochelys coriacea 264681762 27794 652 Dermochelys coriacea brain-derived neurotrophic factor (BDNF) gene, partial cds.
Dermochelys coriacea 213494297 27794 717 Dermochelys coriacea isolate DC_Atlantic brain-derived neurotrophic factor (BDNF) gene, partial cds.
Dermochelys coriacea 213494295 27794 718 Dermochelys coriacea isolate DC_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Dogania subplana 264681764 159310 647 Dogania subplana brain-derived neurotrophic factor (BDNF) gene, partial cds.
Eretmochelys imbricata 213494313 27787 717 Eretmochelys imbricata isolate EI_Atlantic brain-derived neurotrophic factor (BDNF) gene, partial cds.
Eretmochelys imbricata 213494311 27787 718 Eretmochelys imbricata isolate EI_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Erymnochelys madagascariensis 374115361 44520 691 Erymnochelys madagascariensis voucher MTD_T_4232 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Erymnochelys madagascariensis 72256185 44520 717 Erymnochelys madagascariensis brain-derived neurotrophic factor (BDNF) gene, partial cds.
Hydromedusa tectifera 72256195 61327 717 Hydromedusa tectifera brain-derived neurotrophic factor (BDNF) gene, partial cds.
Kinosternon flavescens 264681768 142484 656 Kinosternon flavescens brain-derived neurotrophic factor (BDNF) gene, partial cds.
Lepidochelys kempii 213494319 8472 717 Lepidochelys kempii isolate LK_Atlantic brain-derived neurotrophic factor (BDNF) gene, partial cds.
Lepidochelys olivacea 375174435 27788 559 Lepidochelys olivacea haplotype 2 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Lepidochelys olivacea 213494317 27788 717 Lepidochelys olivacea isolate LO_Atlantic brain-derived neurotrophic factor (BDNF) gene, partial cds.
Lepidochelys olivacea 213494315 27788 718 Lepidochelys olivacea isolate LO_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Macrochelys temminckii 264681774 571338 662 Macrochelys temminckii brain-derived neurotrophic factor (BDNF) gene, partial cds.
Macrochelys temminckii 213494323 571338 718 Macrochelys temminckii brain-derived neurotrophic factor (BDNF) gene, partial cds.
Manouria emys 264681770 260614 662 Manouria emys brain-derived neurotrophic factor (BDNF) gene, partial cds.
Mauremys mutica 386648726 74926 611 Mauremys mutica voucher MVZ 230476 brain-derived neurotrophic factor gene, partial cds.
Mauremys reevesii 264681772 260615 662 Mauremys reevesii brain-derived neurotrophic factor (BDNF) gene, partial cds.
Natator depressa 213494309 27790 717 Natator depressa isolate ND_Pacific brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelodiscus sinensis 213494325 13735 718 Pelodiscus sinensis brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelodiscus sinensis 264681780 13735 550 Pelodiscus sinensis brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelomedusa subrufa 72256191 44522 717 Pelomedusa subrufa brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelomedusa subrufa 213494327 44522 718 Pelomedusa subrufa brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelomedusa subrufa 374115355 44522 679 Pelomedusa subrufa voucher MTD_T 5509 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelomedusa subrufa 374115353 44522 625 Pelomedusa subrufa voucher FGZC324 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelomedusa subrufa 264681782 44522 610 Pelomedusa subrufa brain-derived neurotrophic factor (BDNF) gene, partial cds.
Peltocephalus dumeriliana 72256189 329145 712 Peltocephalus dumeriliana brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelusios castanoides 374115359 904216 679 Pelusios castanoides voucher MTD_T 5212 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelusios gabonensis 72256193 329147 717 Pelusios gabonensis brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pelusios sp. AC-2011 374115357 1127752 691 Pelusios sp. AC-2011 voucher DRV5735 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Platysternon megacephalum 264681776 55544 653 Platysternon megacephalum brain-derived neurotrophic factor (BDNF) gene, partial cds.
Podocnemis expansa 374115363 44507 679 Podocnemis expansa voucher MTD_T_4890 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Podocnemis expansa 399144117 44507 670 Podocnemis expansa brain-derived neurotrophic factor (BDNF) gene, partial cds.
Podocnemis expansa 72256187 44507 717 Podocnemis expansa brain-derived neurotrophic factor (BDNF) gene, partial cds.
Psammobates pardalis 374115369 569598 653 Psammobates pardalis voucher MTD_T_5448 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Psammobates pardalis 264681778 569598 662 Psammobates pardalis brain-derived neurotrophic factor (BDNF) gene, partial cds.
Pyxis arachnoides 374115367 66194 668 Pyxis arachnoides voucher Gk190 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Rhinoclemmys annulata 264681784 260654 662 Rhinoclemmys annulata brain-derived neurotrophic factor (BDNF) gene, partial cds.
Staurotypus triporcatus 72256197 55537 624 Staurotypus triporcatus brain-derived neurotrophic factor (BDNF) gene, partial cds.
Sternotherus odoratus 264681786 142480 647 Sternotherus odoratus brain-derived neurotrophic factor (BDNF) gene, partial cds.
Testudo graeca 264681788 86975 662 Testudo graeca brain-derived neurotrophic factor (BDNF) gene, partial cds.
Trachemys scripta elegans 295986645 31138 948 Trachemys scripta elegans brain-derived neurotrophic factor transcript variant 3 (BDNF) mRNA, complete cds, alternatively spliced.
Trachemys scripta elegans 295986649 31138 1011 Trachemys scripta elegans brain-derived neurotrophic factor transcript variant 5 (BDNF) mRNA, complete cds, alternatively spliced.
Trionyx triunguis 341839733 101491 672 Trionyx triunguis voucher TtSDZ brain-derived neurotrophic factor (BDNF) gene, partial cds.
Trionyx triunguis 341839735 101491 672 Trionyx triunguis voucher Tt03 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Trionyx triunguis 341839737 101491 672 Trionyx triunguis voucher Tt14 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Trionyx triunguis 341839739 101491 672 Trionyx triunguis voucher Tt20 brain-derived neurotrophic factor (BDNF) gene, partial cds.
Trionyx triunguis 341839741 101491 672 Trionyx triunguis voucher Tt24 brain-derived neurotrophic factor (BDNF) gene, partial cds.


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