Testudines (rel. 194): Cluster 66

Number of sequences (GIs)15
Number of distinct taxon IDs (TIs)2
Shortest sequence247 nt -- Elseya branderhorsti voucher UC:AA042819 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Longest sequence249 nt -- Myuchelys novaeguineae voucher UC:AA042024 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Maximum alignment density1 0.994
Cluster statusCluster is redundant with its child cluster
View tree
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  

Download cluster...
  • Unaligned cluster in Fasta format
Download alignments...
  • Muscle alignment in Fasta format (Color view)
Download a RAxML optimal tree with branch lengths (Muscle alignment)...
Download a midpoint rooted RAxML optimal tree with branch lengths (Muscle alignment)...


NCBI taxon name GI TI Length Defline
Elseya branderhorsti 392499340 904186 247 Elseya branderhorsti voucher UC:AA042819 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Elseya branderhorsti 392499336 904186 248 Elseya branderhorsti voucher UC:AA042608 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Elseya branderhorsti 392499338 904186 248 Elseya branderhorsti voucher UC:AA042052 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Elseya branderhorsti 392499334 904186 248 Elseya branderhorsti voucher UC:AA042626 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499356 904238 247 Myuchelys novaeguineae voucher UC:AA042038 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499350 904238 247 Myuchelys novaeguineae voucher UC:AA042027 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499358 904238 249 Myuchelys novaeguineae voucher UC:AA042024 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499354 904238 247 Myuchelys novaeguineae voucher UC:AA042081 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499342 904238 247 Myuchelys novaeguineae voucher UC:AA042037 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499362 904238 248 Myuchelys novaeguineae voucher UC:AA042028 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499344 904238 247 Myuchelys novaeguineae voucher UC:AA036130 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499346 904238 247 Myuchelys novaeguineae voucher UC:AA036607 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499352 904238 247 Myuchelys novaeguineae voucher UC:AA042035 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499348 904238 247 Myuchelys novaeguineae voucher UC:AA036613 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.
Myuchelys novaeguineae 392499360 904238 247 Myuchelys novaeguineae voucher UC:AA042026 NADH dehydrogenase subunit 4 gene, partial cds; tRNA-His and tRNA-Ser genes, complete sequence; and tRNA-Leu gene, partial sequence; mitochondrial.


Back to taxonomic hierarchy view
Back to Phylota Browser home