Testudines (rel. 194): Cluster 222

Number of sequences (GIs)1
Number of distinct taxon IDs (TIs)1
Shortest sequence252 nt -- Podocnemis expansa microsatellite PE1075 sequence.
Longest sequence252 nt -- Podocnemis expansa microsatellite PE1075 sequence.
Maximum alignment density1 1.000
Cluster statusCluster is redundant with its child cluster
View tree
  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  

Download cluster...
  • Unaligned cluster in Fasta format
Download alignments...
  • Muscle alignment in Fasta format (Color view)
Download a RAxML optimal tree with branch lengths (Muscle alignment)...
Download a midpoint rooted RAxML optimal tree with branch lengths (Muscle alignment)...


NCBI taxon name GI TI Length Defline
Podocnemis expansa 7549208 44507 252 Podocnemis expansa microsatellite PE1075 sequence.


Back to taxonomic hierarchy view
Back to Phylota Browser home