Testudines (rel. 194): Cluster 125

Number of sequences (GIs)39
Number of distinct taxon IDs (TIs)39
Shortest sequence451 nt -- Graptemys pseudogeographica kohnii vimentin (Vim) gene, intron 4 and partial cds.
Longest sequence693 nt -- Cuora flavomarginata vimentin (Vim) gene, intron 4 and partial cds.
Maximum alignment density1 0.924
Cluster statusCluster is redundant with its child cluster
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  1The fraction of non-missing nucleotides in an ideal alignment if no gaps had to be introduced. Low values indicate that cluster sequences are heterogeneous in length, with possibly only local homologies (for example, if one sequence is a complete mitochondrial genome, and others are single mt genes).
  

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NCBI taxon name GI TI Length Defline
Actinemys marmorata 284177410 335395 664 Actinemys marmorata vimentin (Vim) gene, intron 4 and partial cds.
Chrysemys picta marginata 284177412 391339 568 Chrysemys picta marginata vimentin (Vim) gene, intron 4 and partial cds.
Clemmys guttata 284177414 85608 668 Clemmys guttata vimentin (Vim) gene, intron 4 and partial cds.
Cuora flavomarginata 284177406 204965 693 Cuora flavomarginata vimentin (Vim) gene, intron 4 and partial cds.
Deirochelys reticularia 284177416 158819 666 Deirochelys reticularia voucher JJW 2072 vimentin (Vim) gene, intron 4 and partial cds.
Emydoidea blandingii 284177418 85613 671 Emydoidea blandingii voucher FMNH 261563 vimentin (Vim) gene, intron 4 and partial cds.
Emys orbicularis 284177420 82168 669 Emys orbicularis vimentin (Vim) gene, intron 4 and partial cds.
Glyptemys insculpta 284177422 335392 666 Glyptemys insculpta vimentin (Vim) gene, intron 4 and partial cds.
Glyptemys muhlenbergii 284177424 335393 672 Glyptemys muhlenbergii vimentin (Vim) gene, intron 4 and partial cds.
Graptemys barbouri 284177426 33563 656 Graptemys barbouri vimentin (Vim) gene, intron 4 and partial cds.
Graptemys caglei 284177428 33564 656 Graptemys caglei voucher MF 9641 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys flavimaculata 284177430 33566 667 Graptemys flavimaculata vimentin (Vim) gene, intron 4 and partial cds.
Graptemys geographica 284177432 8481 623 Graptemys geographica voucher FMNH 261593 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys gibbonsi 284177434 33567 656 Graptemys gibbonsi vimentin (Vim) gene, intron 4 and partial cds.
Graptemys nigrinoda 284177436 33568 667 Graptemys nigrinoda voucher CM 150955 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys oculifera 284177438 33569 618 Graptemys oculifera voucher MVZ 236247 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys ouachitensis ouachitensis 284177440 391340 608 Graptemys ouachitensis ouachitensis voucher CM 150953 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys ouachitensis sabinensis 284177442 580252 648 Graptemys ouachitensis sabinensis voucher MF 0471 vimentin (Vim) gene, intron 4 and partial cds.
Graptemys pseudogeographica kohnii 284177444 580253 451 Graptemys pseudogeographica kohnii vimentin (Vim) gene, intron 4 and partial cds.
Graptemys pulchra 284177446 33572 656 Graptemys pulchra vimentin (Vim) gene, intron 4 and partial cds.
Graptemys versa 284177448 33573 656 Graptemys versa voucher MVZ 236248 vimentin (Vim) gene, intron 4 and partial cds.
Malaclemys terrapin littoralis 284177450 699585 665 Malaclemys terrapin littoralis voucher MF 2462 vimentin (Vim) gene, intron 4 and partial cds.
Malaclemys terrapin terrapin 284177452 391341 665 Malaclemys terrapin terrapin vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys concinna 284177454 270252 583 Pseudemys concinna vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys gorzugi 284177456 667124 459 Pseudemys gorzugi voucher MF 8714 vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys nelsoni 284177458 301539 673 Pseudemys nelsoni voucher JJW 1057 vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys peninsularis 284177460 580248 665 Pseudemys peninsularis voucher JJW 1058 vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys rubriventris 284177462 580249 673 Pseudemys rubriventris voucher JJW 1056 vimentin (Vim) gene, intron 4 and partial cds.
Pseudemys texana 284177464 365650 667 Pseudemys texana vimentin (Vim) gene, intron 4 and partial cds.
Sternotherus odoratus 284177408 142480 654 Sternotherus odoratus vimentin (Vim) gene, intron 4 and partial cds.
Terrapene carolina carolina 284177466 391345 671 Terrapene carolina carolina voucher JJW 1852 vimentin (Vim) gene, intron 4 and partial cds.
Terrapene carolina triunguis 284177468 391347 671 Terrapene carolina triunguis vimentin (Vim) gene, intron 4 and partial cds.
Terrapene coahuila 284177470 158815 671 Terrapene coahuila voucher AO233 vimentin (Vim) gene, intron 4 and partial cds.
Terrapene nelsoni nelsoni 284177472 699598 672 Terrapene nelsoni nelsoni vimentin (Vim) gene, intron 4 and partial cds.
Terrapene ornata ornata 284177474 391342 668 Terrapene ornata ornata vimentin (Vim) gene, intron 4 and partial cds.
Trachemys emolli 284177480 365638 602 Trachemys scripta emolli vimentin (Vim) gene, intron 4 and partial cds.
Trachemys gaigeae 284177476 365625 473 Trachemys gaigeae voucher MF 2449 vimentin (Vim) gene, intron 4 and partial cds.
Trachemys nebulosa 284177482 580251 665 Trachemys scripta nebulosa voucher MVZ 137443 vimentin (Vim) gene, intron 4 and partial cds.
Trachemys venusta 284177484 904225 664 Trachemys scripta venusta voucher MVZ 233246 vimentin (Vim) gene, intron 4 and partial cds.


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